Bo6g015480 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo6g015480 T253137_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g015480.1 MADS box 21 67

Links

Other MADS box family TFs
Other Brassica oleracea TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RAV2 Arabidopsis thaliana AT1G68840 D
RAV1 Arabidopsis thaliana AT1G13260 D
ARF14 Arabidopsis thaliana AT3G25730 D
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I
BGIOSGA002747 Oryza indica BGIOSGA002747 I
BGIOSGA002748 Oryza indica BGIOSGA002748 I
BGIOSGA002753 Oryza indica BGIOSGA002753 I
BGIOSGA020315 Oryza indica BGIOSGA020315 I
Bo2g061320 Brassica oleracea Bo2g061320 I
Bo2g138650 Brassica oleracea Bo2g138650 I
Bo3g138550 Brassica oleracea Bo3g138550 I
Bo5g015210 Brassica oleracea Bo5g015210 I
Bo5g043120 Brassica oleracea Bo5g043120 I
Bra011002 Brassica rapa Bra011002 I
Bra019821 Brassica rapa Bra019821 I
Bra024735 Brassica rapa Bra024735 I
Bra025159 Brassica rapa Bra025159 I
Bra026509 Brassica rapa Bra026509 I
Bra026917 Brassica rapa Bra026917 I
Bra038346 Brassica rapa Bra038346 I
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I
GLYMA01G22260 Glycine max GLYMA01G22260 I
GLYMA02G11060 Glycine max GLYMA02G11060 I
GLYMA10G34760 Glycine max GLYMA10G34760 I
GLYMA20G32730 Glycine max GLYMA20G32730 I
GRMZM2G059939 Zea mays GRMZM2G059939 I
GRMZM2G159592 Zea mays GRMZM2G159592 I
GRMZM2G169654 Zea mays GRMZM2G169654 I
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I
GSMUA_AchrUn_randomG06880_001 Musa acuminata GSMUA_AchrUn_randomG06880_001 I
LPERR01G02360 Leersia perrieri LPERR01G02360 I
LPERR01G02380 Leersia perrieri LPERR01G02380 I
LPERR01G23470 Leersia perrieri LPERR01G23470 I
LPERR05G20600 Leersia perrieri LPERR05G20600 I
MLOC_5512 Hordeum vulgare MLOC_5512 I
MLOC_56567 Hordeum vulgare MLOC_56567 I
MLOC_63261 Hordeum vulgare MLOC_63261 I
MLOC_75135 Hordeum vulgare MLOC_75135 I
MLOC_7940 Hordeum vulgare MLOC_7940 I
MTR_1g093600 Medicago truncatula MTR_1g093600 I
MTR_5g053920 Medicago truncatula MTR_5g053920 I
OB01G12600 Oryza brachyantha OB01G12600 I
OBART01G02610 Oryza barthii OBART01G02610 I
OBART01G27360 Oryza barthii OBART01G27360 I
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I
OMERI01G02480 Oryza meridionalis OMERI01G02480 I
OMERI01G02500 Oryza meridionalis OMERI01G02500 I
OMERI01G25110 Oryza meridionalis OMERI01G25110 I
OMERI05G22110 Oryza meridionalis OMERI05G22110 I
ONIVA01G02970 Oryza nivara ONIVA01G02970 I
ONIVA01G02990 Oryza nivara ONIVA01G02990 I
ONIVA01G31290 Oryza nivara ONIVA01G31290 I
ONIVA05G26000 Oryza nivara ONIVA05G26000 I
OPUNC01G02240 Oryza punctata OPUNC01G02240 I
OPUNC01G27280 Oryza punctata OPUNC01G27280 I
OPUNC05G22370 Oryza punctata OPUNC05G22370 I
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I
OS01G0140700 Oryza sativa OS01G0140700 I
OS01G0141000 Oryza sativa OS01G0141000 I
OS01G0693400 Oryza sativa OS01G0693400 I
OS05G0549800 Oryza sativa OS05G0549800 I
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I
PRUPE_ppa026046mg Prunus persica PRUPE_ppa026046mg I
Sb03g006590 Sorghum bicolor Sb03g006590 I
Sb03g031860 Sorghum bicolor Sb03g031860 I
Sb09g027530 Sorghum bicolor Sb09g027530 I
RAV1 Arabidopsis lyrata scaffold_101479.1 I
TEM1 Arabidopsis lyrata scaffold_102941.1 I
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I
Si001909m.g Setaria italica Si001909m.g I
Si004045m.g Setaria italica Si004045m.g I
Si024576m.g Setaria italica Si024576m.g I
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I
TCM_011862 Theobroma cacao TCM_011862 I
TCM_019508 Theobroma cacao TCM_019508 I
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I
TRIUR3_24851 Triticum urartu TRIUR3_24851 I
TRIUR3_27886 Triticum urartu TRIUR3_27886 I
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I
Ca_24123 Cicer arietinum Ca_24123 I
Cla000872 Citrullus lanatus Cla000872 I
Cla020675 Citrullus lanatus Cla020675 I
Pm015500 Prunus mume Pm015500 I
Pm029015 Prunus mume Pm029015 I
29738.m001050 Ricinus communis 29738.m001050 I
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I
Cucsa.147340 Cucumis sativus Cucsa.147340 I
Cucsa.283870 Cucumis sativus Cucsa.283870 I
e_gw1.63.77.1 Physcomitrella patens e_gw1.63.77.1 I
gw1.135.126.1 Physcomitrella patens gw1.135.126.1 I
mgf019592m Mimulus guttatus mgf019592m I
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I
Carubv10009612m.g Capsella rubella Carubv10009612m.g I
Carubv10019207m.g Capsella rubella Carubv10019207m.g I
Carubv10020536m.g Capsella rubella Carubv10020536m.g I
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I
Eucgr.D00053 Eucalyptus grandis Eucgr.D00053 I
Eucgr.L01673 Eucalyptus grandis Eucgr.L01673 I
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I
Lus10021707.g Linum usitatissimum Lus10021707.g I
Lus10041487.g Linum usitatissimum Lus10041487.g I
MDP0000128924 Malus domestica MDP0000128924 I
MDP0000939633 Malus domestica MDP0000939633 I
MDP0000945267 Malus domestica MDP0000945267 I
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I
Pavir.J00384 Panicum virgatum Pavir.J00384 I
Pavir.J13012 Panicum virgatum Pavir.J13012 I
Pavir.J23476 Panicum virgatum Pavir.J23476 I
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I
PK15652.1 Cannabis sativa PK15652.1 I
gene10330-v1.0-hybrid Fragaria vesca gene10330-v1.0-hybrid N