LPERR01G23470 (Leersia perrieri)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2)
PF02362 (B3) 		IPR001471
IPR003340 		LPERR01G23470 T010460_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF14
M01648_2.00 		Arabidopsis thaliana
RCAACAKA
TMTGTTGY		 PBM
Weirauch et al.(2014)
pTH8727 		0.769 0.769
RAV1
M06692_2.00 		Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN
NNHHMDDDWDDWWTHTGTTGN		 Dap-seq
OMalley et al.(2016)
RAV1_colamp_a 		0.769 0.769
RAV1
M06693_2.00 		Arabidopsis thaliana
VCAACADAWWHHAYNHB
VDNRTDDWWTHTGTTGB		 Dap-seq
OMalley et al.(2016)
RAV1_col 		0.769 0.769
RAV1
M02649_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 SELEX
Mathelier et al.(2014)
MA0582.1 		0.769 0.769
RAV1
M02650_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 SELEX
Mathelier et al.(2014)
MA0583.1 		0.769 0.769
RAV1
M09748_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 Transfac
Matys et al.(2006)
P$RAV1_01 		0.769 0.769
RAV1
M09749_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 Transfac
Matys et al.(2006)
P$RAV1_02 		0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR01G23470.1 AP2 73 122
LPERR01G23470.1 B3 207 313

Links

Other AP2,B3 family TFs
Other Leersia perrieri TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.973
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.973
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.973
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.973
OBART01G27360 Oryza barthii OBART01G27360 I 0.973
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.973
OS01G0693400 Oryza sativa OS01G0693400 I 0.973
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.959
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.925
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.918
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.912
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.912
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.912
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.898
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.891
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.891
OS05G0549800 Oryza sativa OS05G0549800 I 0.891
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.884
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.884
Si024576m.g Setaria italica Si024576m.g I 0.878
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.878
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.871
Si004045m.g Setaria italica Si004045m.g I 0.871
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.871
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.864
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.852
GRMZM2G159592 Zea mays GRMZM2G159592 I 0.844
BGIOSGA000982 Oryza indica BGIOSGA000982 I 0.830
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.796
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.796
Pm029015 Prunus mume Pm029015 I 0.796
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.796
MDP0000128924 Malus domestica MDP0000128924 I 0.796
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.796
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.796
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.793
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.789
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.789
Ca_24123 Cicer arietinum Ca_24123 I 0.789
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.789
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.789
LPERR01G02360 Leersia perrieri LPERR01G02360 I 0.789
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.789
PK15652.1 Cannabis sativa PK15652.1 I 0.787
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.782
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.782
Ca_08436 Cicer arietinum Ca_08436 I 0.782
TCM_011862 Theobroma cacao TCM_011862 I 0.782
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.782
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.782
mgf019592m Mimulus guttatus mgf019592m I 0.782
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.782
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.782
OPUNC01G02240 Oryza punctata OPUNC01G02240 I 0.781
MDP0000939633 Malus domestica MDP0000939633 I 0.780
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.778
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.776
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.776
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.776
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.776
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.776
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.776
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.776
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.776
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.776
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.776
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.776
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.776
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.773
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.772
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.769
Bo5g015210 Brassica oleracea Bo5g015210 I 0.769
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.769
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I 0.769
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.769
ARF14 Arabidopsis thaliana AT3G25730 D 0.769
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.769
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.769
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.769
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.769
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.769
RAV2 Arabidopsis thaliana AT1G68840 D 0.769
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.769
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.769
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.769
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.769
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.769
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.769
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.769
Bra026917 Brassica rapa Bra026917 I 0.769
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.769
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.769
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.769
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.769
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.769
OB01G12600 Oryza brachyantha OB01G12600 I 0.769
OBART01G02610 Oryza barthii OBART01G02610 I 0.769
OS01G0140700 Oryza sativa OS01G0140700 I 0.769
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.769
Bra019821 Brassica rapa Bra019821 I 0.769
29738.m001050 Ricinus communis 29738.m001050 I 0.767
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.767
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.767
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.765
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.762
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.762
Bo3g138550 Brassica oleracea Bo3g138550 I 0.762
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.762
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.762
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.762
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.762
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.762
Bo5g043120 Brassica oleracea Bo5g043120 I 0.762
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.762
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.760
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.758
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.755
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.755
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.755
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.755
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.755
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.755
LPERR01G02380 Leersia perrieri LPERR01G02380 I 0.755
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I 0.755
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.755
Si001909m.g Setaria italica Si001909m.g I 0.755
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.755
OS01G0141000 Oryza sativa OS01G0141000 I 0.755
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.755
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.753
RAV1 Arabidopsis thaliana AT1G13260 D 0.753
Bra024735 Brassica rapa Bra024735 I 0.752
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.750
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.750
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.748
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.748
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.747
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.747
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.747
Cla020675 Citrullus lanatus Cla020675 I 0.747
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.745
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.745
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.745
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.742
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.742
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.742
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I 0.742
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.742
Bra038346 Brassica rapa Bra038346 I 0.742
Bra011002 Brassica rapa Bra011002 I 0.740
Cla000872 Citrullus lanatus Cla000872 I 0.738
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I 0.735
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.735
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.735
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.728
Bra026509 Brassica rapa Bra026509 I 0.728
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.727
Bo2g061320 Brassica oleracea Bo2g061320 I 0.727
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I 0.721
Bo2g138650 Brassica oleracea Bo2g138650 I 0.720
TCM_019508 Theobroma cacao TCM_019508 I 0.714
Pm015500 Prunus mume Pm015500 I 0.714
F775_20035 Aegilops tauschii F775_20035 N 0.707
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I 0.707
gene10330-v1.0-hybrid Fragaria vesca gene10330-v1.0-hybrid N 0.701
PRUPE_ppa026046mg Prunus persica PRUPE_ppa026046mg I 0.700
Sb09g004140 Sorghum bicolor Sb09g004140 N 0.700