CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_8g086290
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_8g086290
T254833_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET04240
MADS box
20
67
KLEKETNKQVTFSKRRQGLFRKASELCTLCDVHAAIIVFSPAGKLHCF
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene01788-v1.0-hybrid
Fragaria vesca
gene01788-v1.0-hybrid
I
0.729
MTR_4g036915
Medicago truncatula
MTR_4g036915
I
0.708
MTR_7g028448
Medicago truncatula
MTR_7g028448
I
0.708
VIT_03s0088g00600
Vitis vinifera
VIT_03s0088g00600
N
0.708
chr5.LjT25B19.200.nd
Lotus japonicus
chr5.LjT25B19.200.nd
N
0.729
MDP0000168914
Malus domestica
MDP0000168914
N
0.708
Gorai.006G127800
Gossypium raimondii
Gorai.006G127800
N
0.729
mgf024307m
Mimulus guttatus
mgf024307m
N
0.708
mgf018529m
Mimulus guttatus
mgf018529m
N
0.708
29613.m000367
Ricinus communis
29613.m000367
N
0.708
Pm021070
Prunus mume
Pm021070
N
0.729
Ca_18845
Cicer arietinum
Ca_18845
N
0.792
Ca_04658
Cicer arietinum
Ca_04658
N
0.771
Al_scaffold_0001_74
Arabidopsis lyrata
Al_scaffold_0001_74
N
0.708
TCM_040735
Theobroma cacao
TCM_040735
N
0.729
PRUPE_ppa017246mg
Prunus persica
PRUPE_ppa017246mg
N
0.729
MTR_4g127140
Medicago truncatula
MTR_4g127140
N
0.854
MTR_2g105290
Medicago truncatula
MTR_2g105290
N
0.833
GLYMA20G27361
Glycine max
GLYMA20G27361
N
0.771
GLYMA17G01771
Glycine max
GLYMA17G01771
N
0.771
Bra026764
Brassica rapa
Bra026764
N
0.708