PDK_20s1688321g001 (Phoenix dactylifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 PDK_20s1688321g001 T259454_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1688321g001 MADS box 10 53

Links

Other MADS box family TFs
Other Phoenix dactylifera TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.711
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.727
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.711
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.727
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I 0.705
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.756
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I 0.727
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.727
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.727
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.717
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.750
evm.TU.supercontig_185.7 Carica papaya evm.TU.supercontig_185.7 I 0.738
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.717
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.750
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.708
MDP0000925348 Malus domestica MDP0000925348 I 0.773
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.708
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.708
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I 0.741
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.727
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.733
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.800
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.841
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.844
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.705
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.750
Ca_08934 Cicer arietinum Ca_08934 I 0.705
Pm004396 Prunus mume Pm004396 I 0.733
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.705
GSMUA_Achr8G06150_001 Musa acuminata GSMUA_Achr8G06150_001 N 0.717
evm.TU.supercontig_30.164 Carica papaya evm.TU.supercontig_30.164 N 0.705
MTR_4g031910 Medicago truncatula MTR_4g031910 N 0.705
TCM_022993 Theobroma cacao TCM_022993 N 0.705
Pavir.Ib03850 Panicum virgatum Pavir.Ib03850 N 0.705
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N 0.800
GSMUA_Achr2G18410_001 Musa acuminata GSMUA_Achr2G18410_001 N 0.710
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.708
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N 0.705
Aquca_003_00269 Aquilegia coerulea Aquca_003_00269 N 0.711
Aquca_003_00270 Aquilegia coerulea Aquca_003_00270 N 0.733
Aquca_003_00271 Aquilegia coerulea Aquca_003_00271 N 0.733
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N 0.705
evm.TU.contig_35762 Carica papaya evm.TU.contig_35762 N 0.711
Aquca_003_00272 Aquilegia coerulea Aquca_003_00272 N 0.733
Aquca_029_00010 Aquilegia coerulea Aquca_029_00010 N 0.705
evm.TU.contig_25049.2 Carica papaya evm.TU.contig_25049.2 N 0.711