CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb09g021780
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb09g021780
T295594_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb09g021780.1
NAC/NAM
5
152
APGFRFYPTEEELICFYLRNKLSGTRCGDIERVIPVADVCALDPWELSGTSIVVPILSAEMEWTAAHRAAYSGNEEPWFYFCPRQEREARGGRPSRTTPSGYWKAAGTPGLVYAADGRPIGTKKTMVFYRGRAPAGAKTKWKLNEYKA
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PC-MYB1
Arabidopsis thaliana
AT4G32730
D
Q948S5_TOBAC
Nicotiana tabacum
Q948S5_TOBAC
D
PK12011.1
Cannabis sativa
PK12011.1
D
AMTR_s00012p00208260
Amborella trichopoda
AMTR_s00012p00208260
I
MYB3R-3
Arabidopsis thaliana
AT3G09370
I
Bo3g171130
Brassica oleracea
Bo3g171130
I
Bo7g115810
Brassica oleracea
Bo7g115810
I
Bra009597
Brassica rapa
Bra009597
I
Bra034531
Brassica rapa
Bra034531
I
BRADI2G54640
Brachypodium distachyon
BRADI2G54640
I
fgenesh1_pg.C_scaffold_3000839
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000839
I
PC-MYB1
Arabidopsis lyrata
fgenesh2_kg.7__866__AT4G32730.2
I
GLYMA03G19470
Glycine max
GLYMA03G19470
I
GLYMA04G08550
Glycine max
GLYMA04G08550
I
GLYMA06G08660
Glycine max
GLYMA06G08660
I
GLYMA07G15820
Glycine max
GLYMA07G15820
I
GLYMA18G39740
Glycine max
GLYMA18G39740
I
GSMUA_Achr7G10520_001
Musa acuminata
GSMUA_Achr7G10520_001
I
MLOC_10556
Hordeum vulgare
MLOC_10556
I
MTR_1g026870
Medicago truncatula
MTR_1g026870
I
MTR_7g061330
Medicago truncatula
MTR_7g061330
I
MTR_7g461410
Medicago truncatula
MTR_7g461410
I
OB01G18340
Oryza brachyantha
OB01G18340
I
OB01G45570
Oryza brachyantha
OB01G45570
I
ORGLA01G0073200
Oryza glaberrima
ORGLA01G0073200
I
PGSC0003DMG400008908
Solanum tuberosum
PGSC0003DMG400008908
I
PRUPE_ppa000676mg
Prunus persica
PRUPE_ppa000676mg
I
Solyc08g068320.2
Solanum lycopersicum
Solyc08g068320.2
I
Solyc09g010820.2
Solanum lycopersicum
Solyc09g010820.2
I
TCM_021936
Theobroma cacao
TCM_021936
I
Traes_1AS_61D017632
Triticum aestivum
Traes_1AS_61D017632
I
Ca_14925
Cicer arietinum
Ca_14925
I
Cla023357
Citrullus lanatus
Cla023357
I
Pm005124
Prunus mume
Pm005124
I
29794.m003447
Ricinus communis
29794.m003447
I
cassava12645.valid.m1
Manihot esculenta
cassava12645.valid.m1
I
Cucsa.311420
Cucumis sativus
Cucsa.311420
I
Bostr.22252s0130
Boechera stricta
Bostr.22252s0130
I
Bostr.7867s1124
Boechera stricta
Bostr.7867s1124
I
Cagra.0487s0012
Capsella grandiflora
Cagra.0487s0012
I
Cagra.2515s0028
Capsella grandiflora
Cagra.2515s0028
I
Carubv10000643m.g
Capsella rubella
Carubv10000643m.g
I
Carubv10013377m.g
Capsella rubella
Carubv10013377m.g
I
Ciclev10007316m.g
Citrus clementina
Ciclev10007316m.g
I
Eucgr.K03133
Eucalyptus grandis
Eucgr.K03133
I
evm.TU.supercontig_228.17
Carica papaya
evm.TU.supercontig_228.17
I
gene08793-v1.0-hybrid
Fragaria vesca
gene08793-v1.0-hybrid
I
Gorai.006G172800
Gossypium raimondii
Gorai.006G172800
I
Lus10022136.g
Linum usitatissimum
Lus10022136.g
I
MDP0000219581
Malus domestica
MDP0000219581
I
chr1.CM0147.520.nd
Lotus japonicus
chr1.CM0147.520.nd
I
LjT22I05.60.nd
Lotus japonicus
LjT22I05.60.nd
I
Traes_1AL_51EBF8930
Triticum aestivum
Traes_1AL_51EBF8930
N
NAC090
Arabidopsis thaliana
AT5G22380
N
0.883
BGIOSGA004848
Oryza indica
BGIOSGA004848
N
0.946
BGIOSGA037019
Oryza indica
BGIOSGA037019
N
0.932
Bo2g023870
Brassica oleracea
Bo2g023870
N
0.881
Bo3g016870
Brassica oleracea
Bo3g016870
N
0.871
Bo9g148540
Brassica oleracea
Bo9g148540
N
0.882
Bra002408
Brassica rapa
Bra002408
N
0.883
Bra020188
Brassica rapa
Bra020188
N
0.881
BRADI2G55780
Brachypodium distachyon
BRADI2G55780
N
0.924
F775_13455
Aegilops tauschii
F775_13455
N
0.880
F775_19761
Aegilops tauschii
F775_19761
N
0.930
anac090
Arabidopsis lyrata
fgenesh2_kg.6__2228__AT5G22380.1
N
0.893
GRMZM2G465835
Zea mays
GRMZM2G465835
N
0.992
GRMZM5G832473
Zea mays
GRMZM5G832473
N
0.905
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
0.896
GSMUA_Achr8G01410_001
Musa acuminata
GSMUA_Achr8G01410_001
N
0.947
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.899
LPERR01G32790
Leersia perrieri
LPERR01G32790
N
0.947
LPERR05G14390
Leersia perrieri
LPERR05G14390
N
0.980
LPERR11G02950
Leersia perrieri
LPERR11G02950
N
0.929
LPERR12G03220
Leersia perrieri
LPERR12G03220
N
0.880
MLOC_60153
Hordeum vulgare
MLOC_60153
N
0.882
MLOC_7757
Hordeum vulgare
MLOC_7757
N
0.973
OB05G26010
Oryza brachyantha
OB05G26010
N
0.986
OB12G13350
Oryza brachyantha
OB12G13350
N
0.916
OBART01G38190
Oryza barthii
OBART01G38190
N
0.946
OBART12G03440
Oryza barthii
OBART12G03440
N
0.932
OGLUM01G42380
Oryza glumaepatula
OGLUM01G42380
N
0.946
OGLUM12G04110
Oryza glumaepatula
OGLUM12G04110
N
0.932
OMERI01G35090
Oryza meridionalis
OMERI01G35090
N
0.946
ONIVA01G42870
Oryza nivara
ONIVA01G42870
N
0.946
ONIVA12G03060
Oryza nivara
ONIVA12G03060
N
0.932
OPUNC01G36980
Oryza punctata
OPUNC01G36980
N
0.946
OPUNC05G16010
Oryza punctata
OPUNC05G16010
N
0.899
OPUNC12G03240
Oryza punctata
OPUNC12G03240
N
0.932
ORGLA01G0320200
Oryza glaberrima
ORGLA01G0320200
N
0.946
ORGLA12G0033100
Oryza glaberrima
ORGLA12G0033100
N
0.932
ORUFI01G41540
Oryza rufipogon
ORUFI01G41540
N
0.946
OS01G0862800
Oryza sativa
OS01G0862800
N
0.946
OS12G0156100
Oryza sativa
OS12G0156100
N
0.932
Sb03g040720
Sorghum bicolor
Sb03g040720
N
0.966
Si002586m.g
Setaria italica
Si002586m.g
N
0.901
Si022966m.g
Setaria italica
Si022966m.g
N
0.989
TCM_041364
Theobroma cacao
TCM_041364
N
0.888
Traes_1AL_179FC28F2
Triticum aestivum
Traes_1AL_179FC28F2
N
0.976
Traes_1AL_C76BCC7EC
Triticum aestivum
Traes_1AL_C76BCC7EC
N
0.970
TRAES3BF019300010CFD_g
Triticum aestivum
TRAES3BF019300010CFD_g
N
0.930
Traes_5DL_43FC1B296
Triticum aestivum
Traes_5DL_43FC1B296
N
0.880
TRIUR3_34272
Triticum urartu
TRIUR3_34272
N
0.908
Cla018691
Citrullus lanatus
Cla018691
N
0.897
30055.m001588
Ricinus communis
30055.m001588
N
0.915
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.871
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
0.908
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.898
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.914
Bostr.26527s0039
Boechera stricta
Bostr.26527s0039
N
0.874
Cagra.0846s0014
Capsella grandiflora
Cagra.0846s0014
N
0.873
Carubv10001788m.g
Capsella rubella
Carubv10001788m.g
N
0.873
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
0.889
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
0.891
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.922
Lus10004846.g
Linum usitatissimum
Lus10004846.g
N
0.942
Lus10020643.g
Linum usitatissimum
Lus10020643.g
N
0.942
Pavir.J02276
Panicum virgatum
Pavir.J02276
N
0.913
Pavir.J04751
Panicum virgatum
Pavir.J04751
N
0.987
Pavir.J36282
Panicum virgatum
Pavir.J36282
N
0.989
Thhalv10014563m.g
Eutrema salsugineum
Thhalv10014563m.g
N
0.880