CBG19144 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG19144 T301582_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-177
M02419_2.00 		Caenorhabditis elegans
TCGRGANY
RNTCYCGA		 PBM
Weirauch et al.(2014)
pTH9044 		0.896 0.529
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.805 0.429
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.805 0.429
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG19144 Nuclear receptor 20 91

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.805
nhr-177 Caenorhabditis elegans WBGene00017503 D 0.896
CRE14848 Caenorhabditis remanei CRE14848 I 0.873
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.779
nhr-183 Caenorhabditis elegans WBGene00018266 I 0.765
nhr-179 Caenorhabditis elegans WBGene00017512 I 0.883
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.780
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.757
nhr-117 Caenorhabditis elegans WBGene00003707 I 0.974
nhr-110 Caenorhabditis elegans WBGene00003700 I 0.810
nhr-99 Caenorhabditis elegans WBGene00003689 I 0.804
nhr-98 Caenorhabditis elegans WBGene00003688 I 0.762
nhr-55 Caenorhabditis elegans WBGene00003645 I 0.810
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.893
CRE18428 Caenorhabditis remanei CRE18428 I 0.951
CRE16082 Caenorhabditis remanei CRE16082 I 0.954
CBG01353 Caenorhabditis briggsae CBG01353 I 0.915
CRE14847 Caenorhabditis remanei CRE14847 I 0.913
CRE14846 Caenorhabditis remanei CRE14846 I 0.807
CRE14845 Caenorhabditis remanei CRE14845 I 0.989
CRE12950 Caenorhabditis remanei CRE12950 I 0.779
CRE09222 Caenorhabditis remanei CRE09222 I 0.791
CRE05779 Caenorhabditis remanei CRE05779 I 0.916
CRE05778 Caenorhabditis remanei CRE05778 I 0.882
CJA19466 Caenorhabditis japonica CJA19466 I 0.764
CJA03572 Caenorhabditis japonica CJA03572 I 0.862
CBN00299 Caenorhabditis brenneri CBN00299 I 0.923
CBG19143 Caenorhabditis briggsae CBG19143 I 0.749
CBG19141 Caenorhabditis briggsae CBG19141 I 0.899
CBG06614 Caenorhabditis briggsae CBG06614 I 0.938
CBG06387 Caenorhabditis briggsae CBG06387 I 0.805
CRE01447 Caenorhabditis remanei CRE01447 N 0.818