CBN13729 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN13729 T301758_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.857 0.643
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN13729 Nuclear receptor 74 143

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-3 Caenorhabditis elegans WBGene00003602 D
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.857
WUBG_08518 Wuchereria bancrofti WUBG_08518 I
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.950
Bm12053 Brugia malayi Bm12053 I 0.950
Bm14724 Brugia malayi Bm14724 I
Bm2389 Brugia malayi Bm2389 I 0.985
Bm4894 Brugia malayi Bm4894 I 0.950
CBG06052 Caenorhabditis briggsae CBG06052 I 0.857
CBG07552 Caenorhabditis briggsae CBG07552 I
CBG17744 Caenorhabditis briggsae CBG17744 I 0.979
CBG19594 Caenorhabditis briggsae CBG19594 I 0.867
CBG19604 Caenorhabditis briggsae CBG19604 I 0.961
CBN07936 Caenorhabditis brenneri CBN07936 I 0.961
CBN18797 Caenorhabditis brenneri CBN18797 I 0.843
CBN19233 Caenorhabditis brenneri CBN19233 I
CBN20828 Caenorhabditis brenneri CBN20828 I 0.961
CBN26258 Caenorhabditis brenneri CBN26258 I 0.843
CBN31048 Caenorhabditis brenneri CBN31048 I 0.867
CJA04720 Caenorhabditis japonica CJA04720 I 0.961
CJA08328 Caenorhabditis japonica CJA08328 I 0.986
CJA13646 Caenorhabditis japonica CJA13646 I
CRE02711 Caenorhabditis remanei CRE02711 I 0.986
CRE06661 Caenorhabditis remanei CRE06661 I 0.867
CRE06667 Caenorhabditis remanei CRE06667 I 0.961
CRE10161 Caenorhabditis remanei CRE10161 I 0.986
CRE12779 Caenorhabditis remanei CRE12779 I 0.853
CRE15289 Caenorhabditis remanei CRE15289 I
LOAG_01074 Loa loa LOAG_01074 I 0.985
LOAG_05485 Loa loa LOAG_05485 I 0.950
LOAG_18352 Loa loa LOAG_18352 I
PPA20304 Pristionchus pacificus PPA20304 I
PPA21285 Pristionchus pacificus PPA21285 I 0.952
Ppa-nhr-31 Pristionchus pacificus PPA24219 I 0.985
nhr-31 Caenorhabditis elegans WBGene00003625 I 0.986
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.961
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.830
WBGene00241236 Onchocerca volvulus WBGene00241236 I 0.978
WBGene00241910 Onchocerca volvulus WBGene00241910 I
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.950
Minc01725 Meloidogyne incognita Minc01725 I
Minc13525 Meloidogyne incognita Minc13525 I
Minc15420 Meloidogyne incognita Minc15420 I 0.944
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.864
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.818
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.951
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.864
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I 0.984
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.951
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.864
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.857
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I 0.830
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.859
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.770
ASU_01199 Ascaris suum ASU_01199 I 0.830
ASU_04305 Ascaris suum ASU_04305 I 0.985
ASU_10946 Ascaris suum ASU_10946 I
BTMF_0000273701 Brugia timori BTMF_0000273701 I
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.950
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.847
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I 0.984
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.918
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.882
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.864
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I 0.984
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.781
DME_0000188101 Dracunculus medinensis DME_0000188101 I 0.981
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.807
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.950
EVEC_0000349901 Enterobius vermicularis EVEC_0000349901 I
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I 0.981
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.813
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.851
GPLIN_000669000 Globodera pallida GPLIN_000669000 I
GPLIN_001106000 Globodera pallida GPLIN_001106000 I 0.965
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.950
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I 0.983
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.951
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.864
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.875
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.864
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.962
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.864
HCOI01716000 Haemonchus contortus HCOI01716000 I 0.984
HCOI02077900 Haemonchus contortus HCOI02077900 I
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.864
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I 0.984
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.864
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.913
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.803
L596_g25666 Steinernema carpocapsae L596_g25666 I
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.950
L596_g3809 Steinernema carpocapsae L596_g3809 I 0.981
L596_g3812 Steinernema carpocapsae L596_g3812 I
L889_g29204 Steinernema feltiae L889_g29204 I 0.950
L889_g5777 Steinernema feltiae L889_g5777 I 0.913
L889_g6303 Steinernema feltiae L889_g6303 I
L889_g8361 Steinernema feltiae L889_g8361 I 0.804
L889_g8621 Steinernema feltiae L889_g8621 I 0.981
L892_g21738 Steinernema scapterisci L892_g21738 I
L892_g650 Steinernema scapterisci L892_g650 I
L893_g27196 Steinernema glaseri L893_g27196 I
L893_g27201 Steinernema glaseri L893_g27201 I 0.981
L893_g29388 Steinernema glaseri L893_g29388 I 0.913
L893_g29555 Steinernema glaseri L893_g29555 I
L893_g32432 Steinernema glaseri L893_g32432 I
L893_g6878 Steinernema glaseri L893_g6878 I 0.961
L898_g10316 Steinernema monticolum L898_g10316 I 0.803
L898_g14928 Steinernema monticolum L898_g14928 I
L898_g23965 Steinernema monticolum L898_g23965 I
L898_g24498 Steinernema monticolum L898_g24498 I 0.913
L898_g2799 Steinernema monticolum L898_g2799 I 0.981
L898_g4801 Steinernema monticolum L898_g4801 I 0.950
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.851
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.950
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.962
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I 0.984
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.829
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.950
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I 0.988
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I
NECAME_04545 Necator americanus NECAME_04545 I
NECAME_05125 Necator americanus NECAME_05125 I 0.951
NECAME_12696 Necator americanus NECAME_12696 I 0.864
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.950
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.950
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.864
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I 0.984
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.951
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.950
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.860
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I 0.984
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.805
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.858
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.955
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I 0.978
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.952
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I 0.985
SMUV_0000212501 Syphacia muris SMUV_0000212501 I 0.981
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.747
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.879
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.944
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.881
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I 0.985
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.955
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.858
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.955
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I 0.985
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.881
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.881
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.858
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.955
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I 0.985
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.950
TCNE_0001780601 Toxocara canis TCNE_0001780601 I
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.864
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.864
CBN25890 Caenorhabditis brenneri CBN25890 N
EVEC_0000733201 Enterobius vermicularis EVEC_0000733201 N
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N 0.936
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N 0.889