CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Minc13525
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc13525
T307414_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.985
0.757
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc13525
Nuclear receptor
4
73
TLLNVCGDEASGRHYGASTCFGCKGFFRRTVRANKQYNCRYEEKCQIDKVGRNICRACRFQKCLTVGMEP
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nhr-3
Caenorhabditis elegans
WBGene00003602
D
0.985
WUBG_08518
Wuchereria bancrofti
WUBG_08518
I
0.985
WUBG_10752
Wuchereria bancrofti
WUBG_10752
I
0.849
Bm12053
Brugia malayi
Bm12053
I
0.849
Bm14724
Brugia malayi
Bm14724
I
0.985
Bm4894
Brugia malayi
Bm4894
I
0.849
CBG07552
Caenorhabditis briggsae
CBG07552
I
0.985
CBG19594
Caenorhabditis briggsae
CBG19594
I
0.808
CBG19604
Caenorhabditis briggsae
CBG19604
I
0.849
CBN07936
Caenorhabditis brenneri
CBN07936
I
0.846
CBN19233
Caenorhabditis brenneri
CBN19233
I
0.984
CBN20828
Caenorhabditis brenneri
CBN20828
I
0.846
CBN31048
Caenorhabditis brenneri
CBN31048
I
0.808
CJA04720
Caenorhabditis japonica
CJA04720
I
0.849
CJA13646
Caenorhabditis japonica
CJA13646
I
0.984
CRE06661
Caenorhabditis remanei
CRE06661
I
0.808
CRE06667
Caenorhabditis remanei
CRE06667
I
0.846
CRE15289
Caenorhabditis remanei
CRE15289
I
0.985
LOAG_05485
Loa loa
LOAG_05485
I
0.849
LOAG_18352
Loa loa
LOAG_18352
I
0.985
PPA20304
Pristionchus pacificus
PPA20304
I
0.985
PPA21285
Pristionchus pacificus
PPA21285
I
0.830
Ppa-nhr-3
Pristionchus pacificus
PPA28597
I
0.753
nhr-88
Caenorhabditis elegans
WBGene00003678
I
0.846
nhr-119
Caenorhabditis elegans
WBGene00003709
I
0.808
WBGene00241910
Onchocerca volvulus
WBGene00241910
I
0.985
WBGene00248075
Onchocerca volvulus
WBGene00248075
I
0.849
Minc01725
Meloidogyne incognita
Minc01725
I
0.993
Minc15420
Meloidogyne incognita
Minc15420
I
0.844
ACAC_0000239001
Angiostrongylus cantonensis
ACAC_0000239001
I
0.808
ACAC_0001180201
Angiostrongylus cantonensis
ACAC_0001180201
I
0.845
ACOC_0000732601
Angiostrongylus costaricensis
ACOC_0000732601
I
0.947
ACOC_0001326501
Angiostrongylus costaricensis
ACOC_0001326501
I
0.808
ANCCAN_12539
Ancylostoma caninum
ANCCAN_12539
I
0.849
ANCCAN_18459
Ancylostoma caninum
ANCCAN_18459
I
0.985
ANCCEY_03357
Ancylostoma ceylanicum
ANCCEY_03357
I
0.808
ASIM_0001309901
Anisakis simplex
ASIM_0001309901
I
0.818
ASIM_0001589901
Anisakis simplex
ASIM_0001589901
I
0.981
ASU_10946
Ascaris suum
ASU_10946
I
0.985
BTMF_0000273701
Brugia timori
BTMF_0000273701
I
0.985
BTMF_0001198801
Brugia timori
BTMF_0001198801
I
0.849
BXY_0011200
Bursaphelenchus xylophilus
BXY_0011200
I
0.988
BXY_1595900
Bursaphelenchus xylophilus
BXY_1595900
I
0.784
BXY_1600300
Bursaphelenchus xylophilus
BXY_1600300
I
0.877
DICVIV_02348
Dictyocaulus viviparus
DICVIV_02348
I
0.808
DICVIV_11945
Dictyocaulus viviparus
DICVIV_11945
I
0.979
DME_0000480501
Dracunculus medinensis
DME_0000480501
I
0.850
DME_0000742401
Dracunculus medinensis
DME_0000742401
I
0.808
DME_0000960901
Dracunculus medinensis
DME_0000960901
I
0.843
genemark-nMf.1.1.scaf00140-processed-gene-0.6
Meloidogyne floridensis
genemark-nMf.1.1.scaf00140-processed-gene-0.6
I
0.775
GPLIN_000268400
Globodera pallida
GPLIN_000268400
I
0.877
GPLIN_000669000
Globodera pallida
GPLIN_000669000
I
0.993
GPUH_0000393501
Gongylonema pulchrum
GPUH_0000393501
I
0.849
Hba_14163
Heterorhabditis bacteriophora
Hba_14163
I
0.849
Hba_14958
Heterorhabditis bacteriophora
Hba_14958
I
0.801
HCOI00769300
Haemonchus contortus
HCOI00769300
I
0.808
HCOI01268300
Haemonchus contortus
HCOI01268300
I
0.849
HCOI01406200
Haemonchus contortus
HCOI01406200
I
0.808
HCOI02077900
Haemonchus contortus
HCOI02077900
I
0.985
HPBE_0001043101
Heligmosomoides bakeri
HPBE_0001043101
I
0.808
HPLM_0001680701
Haemonchus placei
HPLM_0001680701
I
0.808
L596_g20569
Steinernema carpocapsae
L596_g20569
I
0.775
L596_g25297
Steinernema carpocapsae
L596_g25297
I
0.835
L596_g25666
Steinernema carpocapsae
L596_g25666
I
0.985
L596_g27086
Steinernema carpocapsae
L596_g27086
I
0.862
L596_g27130
Steinernema carpocapsae
L596_g27130
I
0.808
L596_g3812
Steinernema carpocapsae
L596_g3812
I
0.759
L889_g29204
Steinernema feltiae
L889_g29204
I
0.860
L889_g29246
Steinernema feltiae
L889_g29246
I
0.796
L889_g5777
Steinernema feltiae
L889_g5777
I
0.795
L889_g6303
Steinernema feltiae
L889_g6303
I
0.759
L889_g8361
Steinernema feltiae
L889_g8361
I
0.835
L892_g19201
Steinernema scapterisci
L892_g19201
I
0.824
L892_g21738
Steinernema scapterisci
L892_g21738
I
0.746
L892_g650
Steinernema scapterisci
L892_g650
I
0.985
L893_g27196
Steinernema glaseri
L893_g27196
I
0.759
L893_g29388
Steinernema glaseri
L893_g29388
I
0.775
L893_g29555
Steinernema glaseri
L893_g29555
I
0.985
L893_g6878
Steinernema glaseri
L893_g6878
I
0.860
L898_g10316
Steinernema monticolum
L898_g10316
I
0.835
L898_g14928
Steinernema monticolum
L898_g14928
I
0.784
L898_g23965
Steinernema monticolum
L898_g23965
I
0.759
L898_g24498
Steinernema monticolum
L898_g24498
I
0.775
L898_g4801
Steinernema monticolum
L898_g4801
I
0.860
maker-nMf.1.1.scaf07948-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf07948-snap-gene-0.4
I
0.993
MhA1_Contig217.frz3.gene7
Meloidogyne hapla
MhA1_Contig217.frz3.gene7
I
0.993
MhA1_Contig984.frz3.gene20
Meloidogyne hapla
MhA1_Contig984.frz3.gene20
I
0.877
nAv.1.0.1.g01698
Acanthocheilonema viteae
nAv.1.0.1.g01698
I
0.849
nAv.1.0.1.g09896
Acanthocheilonema viteae
nAv.1.0.1.g09896
I
0.985
NBR_0000170601
Nippostrongylus brasiliensis
NBR_0000170601
I
0.849
NBR_0001432001
Nippostrongylus brasiliensis
NBR_0001432001
I
0.808
nDi.2.2.2.g02781
Dirofilaria immitis
nDi.2.2.2.g02781
I
0.849
nDi.2.2.2.g05078
Dirofilaria immitis
nDi.2.2.2.g05078
I
0.985
NECAME_04545
Necator americanus
NECAME_04545
I
0.985
NECAME_05125
Necator americanus
NECAME_05125
I
0.849
NECAME_12696
Necator americanus
NECAME_12696
I
0.808
nLs.2.1.2.g05858
Litomosoides sigmodontis
nLs.2.1.2.g05858
I
0.985
nLs.2.1.2.g08709
Litomosoides sigmodontis
nLs.2.1.2.g08709
I
0.849
nOo.2.0.1.g04046
Onchocerca ochengi
nOo.2.0.1.g04046
I
0.849
nOo.2.0.1.g05901
Onchocerca ochengi
nOo.2.0.1.g05901
I
0.985
OESDEN_02652
Oesophagostomum dentatum
OESDEN_02652
I
0.808
OESDEN_02943
Oesophagostomum dentatum
OESDEN_02943
I
0.985
OESDEN_17109
Oesophagostomum dentatum
OESDEN_17109
I
0.849
OFLC_0000776201
Onchocerca flexuosa
OFLC_0000776201
I
0.985
OFLC_0001511801
Onchocerca flexuosa
OFLC_0001511801
I
0.849
PTRK_0000510500
Parastrongyloides trichosuri
PTRK_0000510500
I
0.890
PTRK_0000775900
Parastrongyloides trichosuri
PTRK_0000775900
I
0.864
scaffold395-EXSNAP2012.23
Pristionchus exspectatus
scaffold395-EXSNAP2012.23
I
0.753
scaffold51-EXSNAP2012.23
Pristionchus exspectatus
scaffold51-EXSNAP2012.23
I
0.830
SMUV_0000428701
Syphacia muris
SMUV_0000428701
I
0.985
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2
I
0.993
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
I
0.844
SPAL_0000110800
Strongyloides papillosus
SPAL_0000110800
I
0.770
SPAL_0001157400
Strongyloides papillosus
SPAL_0001157400
I
0.864
SPAL_0001436300
Strongyloides papillosus
SPAL_0001436300
I
0.890
SSTP_0000217700
Strongyloides stercoralis
SSTP_0000217700
I
0.864
SSTP_0000831700
Strongyloides stercoralis
SSTP_0000831700
I
0.890
SSTP_0001234400
Strongyloides stercoralis
SSTP_0001234400
I
0.770
SVE_0137800
Strongyloides venezuelensis
SVE_0137800
I
0.770
SVE_0301400
Strongyloides venezuelensis
SVE_0301400
I
0.890
SVE_1633700
Strongyloides venezuelensis
SVE_1633700
I
0.864
SVUK_0001012101
Strongylus vulgaris
SVUK_0001012101
I
0.885
TCLT_0000079701
Thelazia callipaeda
TCLT_0000079701
I
0.985
TCLT_0000173501
Thelazia callipaeda
TCLT_0000173501
I
0.849
TCNE_0001780601
Toxocara canis
TCNE_0001780601
I
0.985
TELCIR_01879
Teladorsagia circumcincta
TELCIR_01879
I
0.985
TELCIR_05080
Teladorsagia circumcincta
TELCIR_05080
I
0.808
TELCIR_07363
Teladorsagia circumcincta
TELCIR_07363
I
0.808
EVEC_0000733201
Enterobius vermicularis
EVEC_0000733201
N
0.782