Brh_R009664 (Buceros rhinoceros)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Brh_R009664 T317746_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfkb2
M09356_2.00 		Mus musculus
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C 		0.817 0.817
NFKB2
M03446_2.00 		Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN		 SELEX
Jolma et al.(2013)
NFKB2_1 		0.805 0.805
NFKB2
M05699_2.00 		Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX 		0.805 0.805
NFKB2
M09344_2.00 		Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B 		0.805 0.805
NFKB2
M05700_2.00 		Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX 		0.805 0.805
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R009664 Rel 31 211

Links

Other Rel family TFs
Other Buceros rhinoceros TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phyra76424 Phytophthora ramorum Phyra76424 N
e_gw1.34.40.1 Phytophthora capsici e_gw1.34.40.1 N
e_gw1.34.32.1 Phytophthora capsici e_gw1.34.32.1 N
e_gw1.2.501.1 Phytophthora capsici e_gw1.2.501.1 N
e_gw1.1936.1.1 Phytophthora capsici e_gw1.1936.1.1 N
snap_masked-pve_contig_11-abinit-gene-0.108 Pythium vexans snap_masked-pve_contig_11-abinit-gene-0.108 N
PYU1_G008757 Pythium ultimum PYU1_G008757 N
PYU1_G008756 Pythium ultimum PYU1_G008756 N
PYU1_G008755 Pythium ultimum PYU1_G008755 N
PYU1_G008748 Pythium ultimum PYU1_G008748 N
Physo128919 Phytophthora sojae Physo128919 N
Physo128916 Phytophthora sojae Physo128916 N
F443_10160 Phytophthora parasitica F443_10160 N
Phyra76423 Phytophthora ramorum Phyra76423 N
Phyra76421 Phytophthora ramorum Phyra76421 N
maker-pir_contig_723-snap-gene-0.9 Pythium irregulare maker-pir_contig_723-snap-gene-0.9 N
maker-pir_contig_2201-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_2201-fgenesh-gene-0.0 N
fgenesh_scip_prom.46568.9634 Phytophthora kernoviae fgenesh_scip_prom.46568.9634 N
fgenesh_scip_prom.46568.9633 Phytophthora kernoviae fgenesh_scip_prom.46568.9633 N
fgenesh_scip_prom.28083.9722 Phytophthora lateralis fgenesh_scip_prom.28083.9722 N
fgenesh_scip_prom.28083.659 Phytophthora lateralis fgenesh_scip_prom.28083.659 N
F443_10169 Phytophthora parasitica F443_10169 N
F443_10168 Phytophthora parasitica F443_10168 N
F443_10163 Phytophthora parasitica F443_10163 N