OGLUM09G16320 (Oryza glumaepatula)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OGLUM09G16320 T322803_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.896 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM09G16320.1 SBP 115 189

Links

Other SBP family TFs
Other Oryza glumaepatula TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL3 Arabidopsis thaliana AT2G33810 D
SPL5 Arabidopsis thaliana AT3G15270 D
SPL6 Arabidopsis thaliana AT1G69170 I
BGIOSGA016888 Oryza indica BGIOSGA016888 I
Bo2g062840 Brassica oleracea Bo2g062840 I
Bo3g027460 Brassica oleracea Bo3g027460 I
Bo4g042390 Brassica oleracea Bo4g042390 I
Bra005470 Brassica rapa Bra005470 I
Bra022954 Brassica rapa Bra022954 I
Bra038324 Brassica rapa Bra038324 I
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I
SPL3 Arabidopsis lyrata fgenesh2_kg.4__1394__AT2G33810.1 I
GLYMA06G36140 Glycine max GLYMA06G36140 I
GLYMA07G14641 Glycine max GLYMA07G14641 I
GLYMA11G16556 Glycine max GLYMA11G16556 I
GLYMA12G27330 Glycine max GLYMA12G27330 I
GLYMA13G31090 Glycine max GLYMA13G31090 I
GLYMA15G08270 Glycine max GLYMA15G08270 I
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I
GSMUA_Achr4G23650_001 Musa acuminata GSMUA_Achr4G23650_001 I
GSMUA_Achr4G26940_001 Musa acuminata GSMUA_Achr4G26940_001 I
GSMUA_Achr5G13440_001 Musa acuminata GSMUA_Achr5G13440_001 I
LPERR04G17030 Leersia perrieri LPERR04G17030 I
MLOC_13032 Hordeum vulgare MLOC_13032 I
MTR_2g014200 Medicago truncatula MTR_2g014200 I
MTR_4g088555 Medicago truncatula MTR_4g088555 I
MTR_7g444860 Medicago truncatula MTR_7g444860 I
MTR_8g463140 Medicago truncatula MTR_8g463140 I
OB04G27960 Oryza brachyantha OB04G27960 I
OBART04G20940 Oryza barthii OBART04G20940 I
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I
OMERI04G17360 Oryza meridionalis OMERI04G17360 I
ONIVA04G19190 Oryza nivara ONIVA04G19190 I
OPUNC04G18620 Oryza punctata OPUNC04G18620 I
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I
SPL7 Oryza sativa OS04G0551500 I
PGSC0003DMG400022824 Solanum tuberosum PGSC0003DMG400022824 I
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I
PGSC0003DMG401029709 Solanum tuberosum PGSC0003DMG401029709 I
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I
POPTR_0004s04630 Populus trichocarpa POPTR_0004s04630 I
POPTR_0007s01030 Populus trichocarpa POPTR_0007s01030 I
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I
PRUPE_ppa000690mg Prunus persica PRUPE_ppa000690mg I
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I
PRUPE_ppa012607mg Prunus persica PRUPE_ppa012607mg I
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I
Si032170m.g Setaria italica Si032170m.g I
Solyc02g077920.2 Solanum lycopersicum Solyc02g077920.2 I
Solyc10g009080.2 Solanum lycopersicum Solyc10g009080.2 I
TCM_005620 Theobroma cacao TCM_005620 I
TCM_029832 Theobroma cacao TCM_029832 I
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I
TRIUR3_23102 Triticum urartu TRIUR3_23102 I
SPL3 Vitis vinifera VIT_10s0003g00050 I
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I
Ca_10879 Cicer arietinum Ca_10879 I
Ca_16243 Cicer arietinum Ca_16243 I
Ca_24655 Cicer arietinum Ca_24655 I
Cla009788 Citrullus lanatus Cla009788 I
Cla020006 Citrullus lanatus Cla020006 I
Cla021411 Citrullus lanatus Cla021411 I
Cla023735 Citrullus lanatus Cla023735 I
Pm008474 Prunus mume Pm008474 I
Pm008475 Prunus mume Pm008475 I
Pm010075 Prunus mume Pm010075 I
Pm011381 Prunus mume Pm011381 I
Pm014154 Prunus mume Pm014154 I
Pm030597 Prunus mume Pm030597 I
29983.m003158 Ricinus communis 29983.m003158 I
30174.m008805 Ricinus communis 30174.m008805 I
30190.m011329 Ricinus communis 30190.m011329 I
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I
cassava46941.m1 Manihot esculenta cassava46941.m1 I
Cucsa.196000 Cucumis sativus Cucsa.196000 I
Cucsa.259800 Cucumis sativus Cucsa.259800 I
Cucsa.272530 Cucumis sativus Cucsa.272530 I
mgf016414m Mimulus guttatus mgf016414m I
mgf017351m Mimulus guttatus mgf017351m I
Aquca_035_00165 Aquilegia coerulea Aquca_035_00165 I
Bostr.23794s0714 Boechera stricta Bostr.23794s0714 I
Cagra.0007s0069 Capsella grandiflora Cagra.0007s0069 I
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I
Cagra.1195s0023 Capsella grandiflora Cagra.1195s0023 I
Carubv10014636m.g Capsella rubella Carubv10014636m.g I
Carubv10020369m.g Capsella rubella Carubv10020369m.g I
Carubv10024311m.g Capsella rubella Carubv10024311m.g I
Ciclev10017104m.g Citrus clementina Ciclev10017104m.g I
Ciclev10020532m.g Citrus clementina Ciclev10020532m.g I
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I
Eucgr.E03260 Eucalyptus grandis Eucgr.E03260 I
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I
evm.TU.supercontig_27.40 Carica papaya evm.TU.supercontig_27.40 I
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I
gene17738-v1.0-hybrid Fragaria vesca gene17738-v1.0-hybrid I
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I
Gorai.004G047200 Gossypium raimondii Gorai.004G047200 I
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I
Gorai.011G029400 Gossypium raimondii Gorai.011G029400 I
Lus10000643.g Linum usitatissimum Lus10000643.g I
Lus10013999.g Linum usitatissimum Lus10013999.g I
Lus10015421.g Linum usitatissimum Lus10015421.g I
Lus10018610.g Linum usitatissimum Lus10018610.g I
Lus10039846.g Linum usitatissimum Lus10039846.g I
MDP0000156994 Malus domestica MDP0000156994 I
MDP0000158607 Malus domestica MDP0000158607 I
MDP0000171877 Malus domestica MDP0000171877 I
MDP0000246046 Malus domestica MDP0000246046 I
MDP0000589558 Malus domestica MDP0000589558 I
MDP0000861601 Malus domestica MDP0000861601 I
MDP0000865739 Malus domestica MDP0000865739 I
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I
orange1.1g017256m.g Citrus sinensis orange1.1g017256m.g I
orange1.1g032310m.g Citrus sinensis orange1.1g032310m.g I
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I
SapurV1A.0012s0510 Salix purpurea SapurV1A.0012s0510 I
SapurV1A.0032s0360 Salix purpurea SapurV1A.0032s0360 I
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I
Thhalv10011728m.g Eutrema salsugineum Thhalv10011728m.g I
Thhalv10017406m.g Eutrema salsugineum Thhalv10017406m.g I
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I
PK26639.1 Cannabis sativa PK26639.1 I
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I
chr6.CM0114.270.nc Lotus japonicus chr6.CM0114.270.nc I
GLYMA07G31880 Glycine max GLYMA07G31880 N
GLYMA13G24590 Glycine max GLYMA13G24590 N
GLYMA13G37130 Glycine max GLYMA13G37130 N
Cucsa.046310 Cucumis sativus Cucsa.046310 N