AMEC001904 (Anopheles melas)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 AMEC001904 T325510_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NfI
M03968_2.00 		Drosophila melanogaster
YTGGCDNNNHGCCAR
YTGGCDNNNHGCCAR		 SELEX
Nitta et al.(2015)
NfI_1 		0.810 0.810
NFIC
M05745_2.00 		Homo sapiens
NTTGGCNNNNTGCCARN
NYTGGCANNNNGCCAAN		 SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX 		0.750 0.750
NFIC
M08164_2.00 		Homo sapiens
NNCTTGGCANN
NNTGCCAAGNN		 ChIP-seq
Mathelier et al.(2014)
MA0161.2 		0.750 0.750
NFIC
M09378_2.00 		Homo sapiens
BYTGGMHBYNDKCCMRV
BYKGGMHNRVDKCCARV		 Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A 		0.750 0.750
NFIC
M09635_2.00 		Homo sapiens
BYTGSCAV
BTGSCARV		 Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished 		0.750 0.750
NFIC
M09636_2.00 		Homo sapiens
BYTGGCHNNNDGCCAR
YTGGCHNNNDGCCARV		 Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished 		0.750 0.750
NFIC
M11278_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CTF1_01 		0.750 0.750
NFIC
M11279_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1C_Q6 		0.750 0.750
NFIC
M05746_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX 		0.750 0.750
Nfic
M09385_2.00 		Mus musculus
NBYTGGCWN
NWGCCARVN		 Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A 		0.738 0.738
NFIX
M03475_2.00 		Homo sapiens
YTGGCNNNNTGCCAA
TTGGCANNNNGCCAR		 SELEX
Jolma et al.(2013)
NFIX_1 		0.702 0.702
NFIX
M03476_2.00 		Homo sapiens
NYTGGCDNN
NNHGCCARN		 SELEX
Jolma et al.(2013)
NFIX_2 		0.702 0.702
NFIX
M03477_2.00 		Homo sapiens
NYTGGCWNN
NNWGCCARN		 SELEX
Jolma et al.(2013)
NFIX_3 		0.702 0.702
NFIX
M03478_2.00 		Homo sapiens
TTGGCANNNTGCCAR
YTGGCANNNTGCCAA		 SELEX
Jolma et al.(2013)
NFIX_4 		0.702 0.702
NFIX
M05741_2.00 		Homo sapiens
NHTGGCDNNNTGCCADN
NHTGGCANNNHGCCADN		 SELEX
Yin et al.(2017)
NFIX_FL_HT-SELEX 		0.702 0.702
NFIX
M05742_2.00 		Homo sapiens
NYTGGCDNNNTGCCARN
NYTGGCANNNHGCCARN		 SELEX
Yin et al.(2017)
NFIX_FL_Methyl-HT-SELEX 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMEC001904-PA SMAD 1 98

Links

Other SMAD family TFs
Other Anopheles melas TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD16 Arabidopsis thaliana AT2G42430 D
AC149818.2_FG009 Zea mays AC149818.2_FG009 I
LBD29 Arabidopsis thaliana AT3G58190 I
BGIOSGA005344 Oryza indica BGIOSGA005344 I
BGIOSGA011445 Oryza indica BGIOSGA011445 I
BGIOSGA011866 Oryza indica BGIOSGA011866 I
BGIOSGA026473 Oryza indica BGIOSGA026473 I
Bo4g016000 Brassica oleracea Bo4g016000 I
Bo4g108600 Brassica oleracea Bo4g108600 I
Bo4g191530 Brassica oleracea Bo4g191530 I
Bo8g092560 Brassica oleracea Bo8g092560 I
Bra004693 Brassica rapa Bra004693 I
Bra014581 Brassica rapa Bra014581 I
Bra016877 Brassica rapa Bra016877 I
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I
F775_02052 Aegilops tauschii F775_02052 I
F775_22967 Aegilops tauschii F775_22967 I
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I
GLYMA10G04040 Glycine max GLYMA10G04040 I
GLYMA13G18191 Glycine max GLYMA13G18191 I
GLYMA19G34590 Glycine max GLYMA19G34590 I
GRMZM2G075499 Zea mays GRMZM2G075499 I
GRMZM2G092483 Zea mays GRMZM2G092483 I
GRMZM2G092542 Zea mays GRMZM2G092542 I
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I
GSMUA_Achr3G27340_001 Musa acuminata GSMUA_Achr3G27340_001 I
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I
GSMUA_Achr5G13230_001 Musa acuminata GSMUA_Achr5G13230_001 I
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I
LPERR02G31040 Leersia perrieri LPERR02G31040 I
LPERR03G03460 Leersia perrieri LPERR03G03460 I
LPERR03G03470 Leersia perrieri LPERR03G03470 I
LPERR08G20530 Leersia perrieri LPERR08G20530 I
MLOC_10784 Hordeum vulgare MLOC_10784 I
MLOC_52276 Hordeum vulgare MLOC_52276 I
MLOC_61947 Hordeum vulgare MLOC_61947 I
OB02G44330 Oryza brachyantha OB02G44330 I
OB03G13880 Oryza brachyantha OB03G13880 I
OB03G13890 Oryza brachyantha OB03G13890 I
OB08G30680 Oryza brachyantha OB08G30680 I
OBART02G37570 Oryza barthii OBART02G37570 I
OBART03G03820 Oryza barthii OBART03G03820 I
OBART03G03830 Oryza barthii OBART03G03830 I
OBART08G23860 Oryza barthii OBART08G23860 I
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I
OGLUM03G03700 Oryza glumaepatula OGLUM03G03700 I
OGLUM03G03710 Oryza glumaepatula OGLUM03G03710 I
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I
OLONG_010223 Oryza longistaminata OLONG_010223 I
OLONG_020841 Oryza longistaminata OLONG_020841 I
OMERI02G35350 Oryza meridionalis OMERI02G35350 I
OMERI07G01660 Oryza meridionalis OMERI07G01660 I
OMERI08G18670 Oryza meridionalis OMERI08G18670 I
ONIVA02G40360 Oryza nivara ONIVA02G40360 I
ONIVA03G03570 Oryza nivara ONIVA03G03570 I
ONIVA03G03580 Oryza nivara ONIVA03G03580 I
ONIVA09G01330 Oryza nivara ONIVA09G01330 I
OPUNC02G34750 Oryza punctata OPUNC02G34750 I
OPUNC03G03510 Oryza punctata OPUNC03G03510 I
OPUNC03G03520 Oryza punctata OPUNC03G03520 I
OPUNC08G21770 Oryza punctata OPUNC08G21770 I
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I
ORGLA03G0035800 Oryza glaberrima ORGLA03G0035800 I
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I
ORUFI03G03540 Oryza rufipogon ORUFI03G03540 I
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I
OS02G0820500 Oryza sativa OS02G0820500 I
OS03G0149000 Oryza sativa OS03G0149000 I
OS03G0149100 Oryza sativa OS03G0149100 I
OS08G0563400 Oryza sativa OS08G0563400 I
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I
Sb01g046990 Sorghum bicolor Sb01g046990 I
Sb01g047000 Sorghum bicolor Sb01g047000 I
Sb04g037550 Sorghum bicolor Sb04g037550 I
Sb07g023810 Sorghum bicolor Sb07g023810 I
LBD16 Arabidopsis lyrata scaffold_403099.1 I
Si015156m.g Setaria italica Si015156m.g I
Si019578m.g Setaria italica Si019578m.g I
Si040019m.g Setaria italica Si040019m.g I
TCM_004106 Theobroma cacao TCM_004106 I
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I
Traes_6BS_179B5B6E1 Triticum aestivum Traes_6BS_179B5B6E1 I
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I
TRIUR3_01477 Triticum urartu TRIUR3_01477 I
TRIUR3_07751 Triticum urartu TRIUR3_07751 I
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I
LBD16 Vitis vinifera VIT_07s0005g03030 I
Ca_12214 Cicer arietinum Ca_12214 I
Cla006088 Citrullus lanatus Cla006088 I
Pm020629 Prunus mume Pm020629 I
29883.m002035 Ricinus communis 29883.m002035 I
cassava15612.m1 Manihot esculenta cassava15612.m1 I
cassava40664.m1 Manihot esculenta cassava40664.m1 I
Cucsa.053440 Cucumis sativus Cucsa.053440 I
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I
Carubv10019250m.g Capsella rubella Carubv10019250m.g I
Carubv10025548m.g Capsella rubella Carubv10025548m.g I
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I
Lus10000707.g Linum usitatissimum Lus10000707.g I
Lus10024877.g Linum usitatissimum Lus10024877.g I
MDP0000131964 Malus domestica MDP0000131964 I
MDP0000145761 Malus domestica MDP0000145761 I
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I
Pavir.Ib00282 Panicum virgatum Pavir.Ib00282 I
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I
Pavir.J03376 Panicum virgatum Pavir.J03376 I
Pavir.J24246 Panicum virgatum Pavir.J24246 I
Pavir.J39638 Panicum virgatum Pavir.J39638 I
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I
Bra016876 Brassica rapa Bra016876 N
BRADI1G75120 Brachypodium distachyon BRADI1G75120 N
MLOC_10783 Hordeum vulgare MLOC_10783 N
OLONG_020840 Oryza longistaminata OLONG_020840 N
OMERI07G01670 Oryza meridionalis OMERI07G01670 N
Traes_4AL_3BA1D51E2 Triticum aestivum Traes_4AL_3BA1D51E2 N
Traes_4BL_F71DE14F7 Triticum aestivum Traes_4BL_F71DE14F7 N
Traes_4BS_B43A99154 Triticum aestivum Traes_4BS_B43A99154 N
Traes_4DL_05F87867C Triticum aestivum Traes_4DL_05F87867C N