L889_g27280 (Steinernema feltiae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 L889_g27280 T336520_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
L889_g27280.t1 Sox 2 66

Links

Other Sox family TFs
Other Steinernema feltiae TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WER Arabidopsis thaliana AT5G14750 D
MYB23 Arabidopsis thaliana AT5G40330 D
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I
Carubv10018791m.g Capsella rubella Carubv10018791m.g I
Carubv10005698m.g Capsella rubella Carubv10005698m.g I
Carubv10001990m.g Capsella rubella Carubv10001990m.g I
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I
MDP0000537324 Malus domestica MDP0000537324 I
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I
PK16315.1 Cannabis sativa PK16315.1 I
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I
MDP0000578193 Malus domestica MDP0000578193 I
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I
MDP0000266683 Malus domestica MDP0000266683 I
MDP0000199965 Malus domestica MDP0000199965 I
MDP0000164048 Malus domestica MDP0000164048 I
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I
TCM_010360 Theobroma cacao TCM_010360 I
TCM_000535 Theobroma cacao TCM_000535 I
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I
POPTR_0015s08700 Populus trichocarpa POPTR_0015s08700 I
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I
GLYMA20G32500 Glycine max GLYMA20G32500 I
TCM_010778 Theobroma cacao TCM_010778 I
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I
Bra025589 Brassica rapa Bra025589 I
Bra025311 Brassica rapa Bra025311 I
Bra023486 Brassica rapa Bra023486 I
Bra008740 Brassica rapa Bra008740 I
Bo9g165670 Brassica oleracea Bo9g165670 I
Bo7g090950 Brassica oleracea Bo7g090950 I
Bo2g012170 Brassica oleracea Bo2g012170 I
GL1 Arabidopsis thaliana AT3G27920 I
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I
cassava27350.m1 Manihot esculenta cassava27350.m1 I
cassava26193.m1 Manihot esculenta cassava26193.m1 I
29739.m003784 Ricinus communis 29739.m003784 I
28226.m000839 Ricinus communis 28226.m000839 I
Pm027045 Prunus mume Pm027045 I
Pm024725 Prunus mume Pm024725 I
Pm013279 Prunus mume Pm013279 I
Pm006678 Prunus mume Pm006678 I
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I
TCM_037379 Theobroma cacao TCM_037379 I
TCM_037377 Theobroma cacao TCM_037377 I
TCM_016886 Theobroma cacao TCM_016886 I
TCM_012057 Theobroma cacao TCM_012057 I
SapurV1A.1178s0040 Salix purpurea SapurV1A.1178s0040 N
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N
Eucgr.C03152 Eucalyptus grandis Eucgr.C03152 N
Eucgr.C03153 Eucalyptus grandis Eucgr.C03153 N