PGSC0003DMG400017627 (Solanum tuberosum)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08536 (Whirly) IPR013742 PGSC0003DMG400017627 T350544_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400045439 Whirly 98 233

Links

Other Whirly family TFs
Other Solanum tuberosum TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.831
TCM_011795 Theobroma cacao TCM_011795 N 0.846
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.728
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N 0.724
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.868
Ca_24297 Cicer arietinum Ca_24297 N 0.728
Cla022217 Citrullus lanatus Cla022217 N 0.838
Pm006558 Prunus mume Pm006558 N 0.846
29736.m002027 Ricinus communis 29736.m002027 N 0.875
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.860
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.838
mgf002465m Mimulus guttatus mgf002465m N 0.897
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.765
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.809
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.824
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.993
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.824
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.824
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.868
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.838
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.838
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.839
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.846
MDP0000268451 Malus domestica MDP0000268451 N 0.868
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.868
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.728
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.728
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.838
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.816
PK22670.1 Cannabis sativa PK22670.1 N 0.860
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.728
WHY1 Arabidopsis thaliana AT1G14410 N 0.809
WHY3 Arabidopsis thaliana AT2G02740 N 0.809
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.728
Bo7g080560 Brassica oleracea Bo7g080560 N 0.824
Bo8g066030 Brassica oleracea Bo8g066030 N 0.838
Bra016702 Brassica rapa Bra016702 N 0.824
Bra024809 Brassica rapa Bra024809 N 0.831
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.713
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.809
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.809
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.787
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.801
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.728
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.787
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.721
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.728
OBART06G03050 Oryza barthii OBART06G03050 N 0.728
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.728
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.728
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.728
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.728
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 0.728
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.728
OS06G0145800 Oryza sativa OS06G0145800 N 0.728
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.846
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.801
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.846
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.735
Si006951m.g Setaria italica Si006951m.g N 0.728