Bo2g024040 (Brassica oleracea)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bo2g024040 T352088_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.861 0.864
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.835 0.644
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.832 0.661
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g024040.1 WRKY 126 186

Links

Other WRKY family TFs
Other Brassica oleracea TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY63 Arabidopsis thaliana AT1G66600 D 0.832
WRKY62 Arabidopsis thaliana AT5G01900 D 0.835
WRKY38 Arabidopsis thaliana AT5G22570 D 0.861
Pm003014 Prunus mume Pm003014 I 0.813
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.842
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.815
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.843
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.826
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.809
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.857
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.820
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.817
mgf002542m Mimulus guttatus mgf002542m I 0.818
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.816
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.816
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.810
Pm003013 Prunus mume Pm003013 I 0.810
Cla018337 Citrullus lanatus Cla018337 I 0.824
Ca_18932 Cicer arietinum Ca_18932 I 0.829
TCM_019689 Theobroma cacao TCM_019689 I 0.814
Si025181m.g Setaria italica Si025181m.g I 0.809
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.861
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.813
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.810
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.823
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.815
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.868
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.851
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.819
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.823
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.810
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.811
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.808
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.817
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.820
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.837
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.817
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.823
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.830
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.843
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.837
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.868
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.868
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.809
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.843
Bra002421 Brassica rapa Bra002421 I 0.866
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.817
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.842
F775_24185 Aegilops tauschii F775_24185 I 0.810
Bra028918 Brassica rapa Bra028918 I 0.852
Bra023211 Brassica rapa Bra023211 I 0.841
Bra020197 Brassica rapa Bra020197 I 0.896
Bra020196 Brassica rapa Bra020196 I 0.889
Bra008459 Brassica rapa Bra008459 I 0.819
Bra008456 Brassica rapa Bra008456 I 0.809
Bra008454 Brassica rapa Bra008454 I 0.826
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.809
Bo5g068250 Brassica oleracea Bo5g068250 I 0.841
Bo2g095820 Brassica oleracea Bo2g095820 I 0.819
Bo01002s040 Brassica oleracea Bo01002s040 I 0.866
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.809
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.809
WRKY66 Arabidopsis thaliana AT1G80590 I 0.841
WRKY64 Arabidopsis thaliana AT1G66560 I 0.838
WRKY67 Arabidopsis thaliana AT1G66550 I 0.838
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.835
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.811
OS05G0478400 Oryza sativa OS05G0478400 I 0.809
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.841
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.809
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.809
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.809
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.809
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.809
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.809
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.809
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.811
OS05G0478800 Oryza sativa OS05G0478800 I 0.809
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.809
OB05G17240 Oryza brachyantha OB05G17240 I 0.808
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.839
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.818
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.810
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.818
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.810
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.809
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.813