CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CADANGAG00002975
(
Aspergillus niger
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADANGAG00002975
T361484_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
aod-5
M02602_2.00
Neurospora crassa
NNCGGRDNNN
NNNHYCCGNN
PBM
Weirauch et al.(2014)
pTH8816
0.612
0.923
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANGAP00002901
Zinc cluster
69
109
RACFACQRAHLTCGDERPCQRCIKRGLQDACHDGVRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Aspergillus niger
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RLT1
Arabidopsis thaliana
AT1G28420
D
AMTR_s00058p00137050
Amborella trichopoda
AMTR_s00058p00137050
I
RLT2
Arabidopsis thaliana
AT5G44180
I
BGIOSGA004179
Oryza indica
BGIOSGA004179
I
BGIOSGA022450
Oryza indica
BGIOSGA022450
I
Bo3g143570
Brassica oleracea
Bo3g143570
I
Bo5g055970
Brassica oleracea
Bo5g055970
I
Bo7g067190
Brassica oleracea
Bo7g067190
I
Bra010869
Brassica rapa
Bra010869
I
Bra032908
Brassica rapa
Bra032908
I
Bra033725
Brassica rapa
Bra033725
I
BRADI2G16647
Brachypodium distachyon
BRADI2G16647
I
BRADI2G46230
Brachypodium distachyon
BRADI2G46230
I
F775_01844
Aegilops tauschii
F775_01844
I
HB-1
Arabidopsis lyrata
fgenesh2_kg.1__3015__AT1G28420.1
I
fgenesh2_kg.8__392__AT5G44180.1
Arabidopsis lyrata
fgenesh2_kg.8__392__AT5G44180.1
I
GLYMA06G44290
Glycine max
GLYMA06G44290
I
GLYMA07G32180
Glycine max
GLYMA07G32180
I
GLYMA13G24370
Glycine max
GLYMA13G24370
I
GLYMA13G30860
Glycine max
GLYMA13G30860
I
GRMZM2G060541
Zea mays
GRMZM2G060541
I
GRMZM2G122750
Zea mays
GRMZM2G122750
I
GRMZM2G125294
Zea mays
GRMZM2G125294
I
GRMZM2G159357
Zea mays
GRMZM2G159357
I
GSMUA_Achr6G26980_001
Musa acuminata
GSMUA_Achr6G26980_001
I
LPERR01G22320
Leersia perrieri
LPERR01G22320
I
LPERR05G21380
Leersia perrieri
LPERR05G21380
I
MLOC_62571
Hordeum vulgare
MLOC_62571
I
MTR_2g014490
Medicago truncatula
MTR_2g014490
I
MTR_4g088375
Medicago truncatula
MTR_4g088375
I
OB01G35240
Oryza brachyantha
OB01G35240
I
OBART05G25730
Oryza barthii
OBART05G25730
I
OGLUM01G29920
Oryza glumaepatula
OGLUM01G29920
I
OGLUM05G27370
Oryza glumaepatula
OGLUM05G27370
I
OMERI01G23740
Oryza meridionalis
OMERI01G23740
I
ONIVA01G29520
Oryza nivara
ONIVA01G29520
I
ONIVA05G27640
Oryza nivara
ONIVA05G27640
I
OPUNC01G25990
Oryza punctata
OPUNC01G25990
I
ORGLA05G0222200
Oryza glaberrima
ORGLA05G0222200
I
ORUFI01G29060
Oryza rufipogon
ORUFI01G29060
I
ORUFI05G27630
Oryza rufipogon
ORUFI05G27630
I
OS01G0672201
Oryza sativa
OS01G0672201
I
POPTR_0007s01330
Populus trichocarpa
POPTR_0007s01330
I
POPTR_0011s05660
Populus trichocarpa
POPTR_0011s05660
I
POPTR_0017s04760
Populus trichocarpa
POPTR_0017s04760
I
PRUPE_ppa000115mg
Prunus persica
PRUPE_ppa000115mg
I
Sb03g030770
Sorghum bicolor
Sb03g030770
I
Sb03g030782
Sorghum bicolor
Sb03g030782
I
SELMODRAFT_422900
Selaginella moellendorffii
SELMODRAFT_422900
I
SELMODRAFT_428998
Selaginella moellendorffii
SELMODRAFT_428998
I
SELMODRAFT_447019
Selaginella moellendorffii
SELMODRAFT_447019
I
SELMODRAFT_447089
Selaginella moellendorffii
SELMODRAFT_447089
I
Si004333m.g
Setaria italica
Si004333m.g
I
Si020949m.g
Setaria italica
Si020949m.g
I
Solyc02g077660.2
Solanum lycopersicum
Solyc02g077660.2
I
Solyc07g053610.2
Solanum lycopersicum
Solyc07g053610.2
I
TCM_008214
Theobroma cacao
TCM_008214
I
TCM_029805
Theobroma cacao
TCM_029805
I
VIT_10s0003g00290
Vitis vinifera
VIT_10s0003g00290
I
VIT_12s0028g03080
Vitis vinifera
VIT_12s0028g03080
I
Ca_00337
Cicer arietinum
Ca_00337
I
Ca_06343
Cicer arietinum
Ca_06343
I
Ca_11272
Cicer arietinum
Ca_11272
I
Cla009803
Citrullus lanatus
Cla009803
I
Pm010098
Prunus mume
Pm010098
I
29983.m003128
Ricinus communis
29983.m003128
I
30190.m011307
Ricinus communis
30190.m011307
I
cassava1593.valid.m1
Manihot esculenta
cassava1593.valid.m1
I
cassava43653.valid.m1
Manihot esculenta
cassava43653.valid.m1
I
Cucsa.046480
Cucumis sativus
Cucsa.046480
I
fgenesh1_pg.scaffold_15000027
Physcomitrella patens
fgenesh1_pg.scaffold_15000027
I
mgf006635m
Mimulus guttatus
mgf006635m
I
mgf006858m
Mimulus guttatus
mgf006858m
I
Aquca_051_00028
Aquilegia coerulea
Aquca_051_00028
I
Bostr.15697s0165
Boechera stricta
Bostr.15697s0165
I
Bostr.3148s0041
Boechera stricta
Bostr.3148s0041
I
Cagra.0381s0009
Capsella grandiflora
Cagra.0381s0009
I
Cagra.1822s0015
Capsella grandiflora
Cagra.1822s0015
I
Carubv10025737m.g
Capsella rubella
Carubv10025737m.g
I
Ciclev10014022m.g
Citrus clementina
Ciclev10014022m.g
I
Ciclev10014023m.g
Citrus clementina
Ciclev10014023m.g
I
Eucgr.D00596
Eucalyptus grandis
Eucgr.D00596
I
Eucgr.K01058
Eucalyptus grandis
Eucgr.K01058
I
evm.TU.supercontig_27.2
Carica papaya
evm.TU.supercontig_27.2
I
evm.TU.supercontig_83.97
Carica papaya
evm.TU.supercontig_83.97
I
gene17756-v1.0-hybrid
Fragaria vesca
gene17756-v1.0-hybrid
I
gene29752-v1.0-hybrid
Fragaria vesca
gene29752-v1.0-hybrid
I
Gorai.008G155100
Gossypium raimondii
Gorai.008G155100
I
Gorai.010G243500
Gossypium raimondii
Gorai.010G243500
I
Gorai.010G256900
Gossypium raimondii
Gorai.010G256900
I
Lus10013979.g
Linum usitatissimum
Lus10013979.g
I
Lus10015325.g
Linum usitatissimum
Lus10015325.g
I
Lus10015400.g
Linum usitatissimum
Lus10015400.g
I
Lus10018634.g
Linum usitatissimum
Lus10018634.g
I
Lus10025454.g
Linum usitatissimum
Lus10025454.g
I
Lus10039870.g
Linum usitatissimum
Lus10039870.g
I
MDP0000192108
Malus domestica
MDP0000192108
I
MDP0000288192
Malus domestica
MDP0000288192
I
orange1.1g000279m.g
Citrus sinensis
orange1.1g000279m.g
I
orange1.1g004454m.g
Citrus sinensis
orange1.1g004454m.g
I
Pavir.Ca00923
Panicum virgatum
Pavir.Ca00923
I
Pavir.J20612
Panicum virgatum
Pavir.J20612
I
SapurV1A.0012s0660
Salix purpurea
SapurV1A.0012s0660
I
SapurV1A.0032s0540
Salix purpurea
SapurV1A.0032s0540
I
SapurV1A.0118s0310
Salix purpurea
SapurV1A.0118s0310
I
SapurV1A.0693s0030
Salix purpurea
SapurV1A.0693s0030
I
SapurV1A.3333s0010
Salix purpurea
SapurV1A.3333s0010
I
SapurV1A.3547s0010
Salix purpurea
SapurV1A.3547s0010
I
Thhalv10003131m.g
Eutrema salsugineum
Thhalv10003131m.g
I
Thhalv10006543m.g
Eutrema salsugineum
Thhalv10006543m.g
I
PK06068.1
Cannabis sativa
PK06068.1
I
PK13272.1
Cannabis sativa
PK13272.1
I