TRIVIDRAFT_213406 (Trichoderma virens)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 TRIVIDRAFT_213406 T385720_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU05308
M02610_2.00 		Neurospora crassa
CGGRNATA
TATNYCCG		 PBM
Weirauch et al.(2014)
pTH9681 		0.612 0.946
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EHK20303 Zinc cluster 101 137

Links

Other Zinc cluster family TFs
Other Trichoderma virens TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL78 Arabidopsis thaliana AT5G65330 D
Bostr.3751s0031 Boechera stricta Bostr.3751s0031 I
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I
fgenesh2_kg.8__2584__AT5G65330.1 Arabidopsis lyrata fgenesh2_kg.8__2584__AT5G65330.1 I
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I
Bostr.0568s0255 Boechera stricta Bostr.0568s0255 I
Bostr.3751s0025 Boechera stricta Bostr.3751s0025 I
Bostr.3751s0030 Boechera stricta Bostr.3751s0030 I
Bra031864 Brassica rapa Bra031864 I
Bostr.3751s0039 Boechera stricta Bostr.3751s0039 I
Bostr.3751s0043 Boechera stricta Bostr.3751s0043 I
Carubv10006654m.g Capsella rubella Carubv10006654m.g I
Carubv10007456m.g Capsella rubella Carubv10007456m.g I
Carubv10007591m.g Capsella rubella Carubv10007591m.g I
Thhalv10005313m.g Eutrema salsugineum Thhalv10005313m.g I
Thhalv10028184m.g Eutrema salsugineum Thhalv10028184m.g I
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I
AGL75 Arabidopsis thaliana AT5G41200 I
AGL51 Arabidopsis thaliana AT4G02235 I
AGL52 Arabidopsis thaliana AT4G11250 I
AGL105 Arabidopsis thaliana AT5G37415 I
AGL77 Arabidopsis thaliana AT5G38740 I
AGL81 Arabidopsis thaliana AT5G39750 I
AGL98 Arabidopsis thaliana AT5G39810 I
AGL76 Arabidopsis thaliana AT5G40120 I
AGL43 Arabidopsis thaliana AT5G40220 I
Bo00615s090 Brassica oleracea Bo00615s090 I
Bo5g117290 Brassica oleracea Bo5g117290 I
Bra022341 Brassica rapa Bra022341 I
Bra025609 Brassica rapa Bra025609 I
Bra025619 Brassica rapa Bra025619 N
Bo4g139620 Brassica oleracea Bo4g139620 N
scaffold_602835.1 Arabidopsis lyrata scaffold_602835.1 N
Carubv10003642m.g Capsella rubella Carubv10003642m.g N
Bra025607 Brassica rapa Bra025607 N
fgenesh2_kg.6__2751__AT5G27070.1 Arabidopsis lyrata fgenesh2_kg.6__2751__AT5G27070.1 N
AGL89 Arabidopsis thaliana AT5G27580 N
fgenesh2_kg.6__2748__AT5G27944.1 Arabidopsis lyrata fgenesh2_kg.6__2748__AT5G27944.1 N