CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GLYMA18G10290 *(Glycine max)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	GLYMA18G10290	T002021_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ERF4 M01616_2.00	Arabidopsis thaliana	VCGCCGCC	GGCGGCGB	PBM Weirauch et al.(2014) pTH8156	0.813	0.860
ERF4 M06616_2.00	Arabidopsis thaliana	YCDCCGCCGCCRHHD	HDDYGGCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF4_col_a	0.813	0.860
ERF4 M06617_2.00	Arabidopsis thaliana	NHNNHNSCGCCGYCRHHDNN	NNHDDYGRCGGCGSNDNNDN	Dap-seq OMalley et al.(2016) ERF4_colamp_a	0.813	0.860
ERF4_TOBAC M09728_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF3_02	0.804	0.840
ERF9 M06670_2.00	Arabidopsis thaliana	YCDCCGCCGYCDHHDYHDYHN	NDRHDRHDDHGRCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF9_col_a	0.797	0.820
ERF9 M06671_2.00	Arabidopsis thaliana	NNHDSCGCCGYCRHWDN	NHWDYGRCGGCGSHDNN	Dap-seq OMalley et al.(2016) ERF9_colamp_a	0.797	0.820
PK19363.1 M01100_2.00	Cannabis sativa	NMGCCGHMNN	NNKDCGGCKN	PBM Lambert et al.(2019) pTH10138	0.787	0.800
PK19363.1 M01643_2.00	Cannabis sativa	CGCCGYCD	HGRCGGCG	PBM Weirauch et al.(2014) pTH9609	0.787	0.800
ERF7 M01617_2.00	Arabidopsis thaliana	NGCCGNMNNN	NNNKNCGGCN	PBM Weirauch et al.(2014) pTH7606	0.781	0.900
ERF7 M06620_2.00	Arabidopsis thaliana	YHNHYNYYDYCDCCGCCGYCD	HGRCGGCGGHGRHRRNRDNDR	Dap-seq OMalley et al.(2016) ERF7_col_a	0.781	0.900
ERF7 M06621_2.00	Arabidopsis thaliana	NNNHNNHNHHDSCGCCGCCRH	DYGGCGGCGSHDDNDNNDNNN	Dap-seq OMalley et al.(2016) ERF7_colamp_a	0.781	0.900
ERF8 M01608_2.00	Arabidopsis thaliana	MGCCGNMNNN	NNNKNCGGCK	PBM Weirauch et al.(2014) pTH8095	0.764	0.800
ERF8 M06586_2.00	Arabidopsis thaliana	NYHDYCKCCGCCGYH	DRCGGCGGMGRHDRN	Dap-seq OMalley et al.(2016) ERF8_col_a	0.764	0.800
ERF8 M06587_2.00	Arabidopsis thaliana	HNNHDSCGCCGYCRHHDN	NHDDYGRCGGCGSHDNND	Dap-seq OMalley et al.(2016) ERF8_colamp_a	0.764	0.800
LEP M06661_2.00	Arabidopsis thaliana	NBCKCCGCCGYHDHHDYHNHH	DDNDRHDDHDRCGGCGGMGVN	Dap-seq OMalley et al.(2016) LEP_col_a	0.746	0.720
ERF3 M01607_2.00	Arabidopsis thaliana	CGCCGSCR	YGSCGGCG	PBM Weirauch et al.(2014) pTH8109	0.732	0.780
ERF3 M06584_2.00	Arabidopsis thaliana	YHDYCKCCGCCGYHD	HDRCGGCGGMGRHDR	Dap-seq OMalley et al.(2016) ERF3_col_a	0.732	0.780
ERF3 M06585_2.00	Arabidopsis thaliana	NNHHDNHNNYDCCGCCGYCR	YGRCGGCGGHRNNDNHDDNN	Dap-seq OMalley et al.(2016) ERF3_colamp_a	0.732	0.780
RAP2-2 M00719_2.00	Arabidopsis thaliana	NNRBYGNN	NNCRVYNN	PBM Chang et al.(2013) pTH7227	0.723	0.720
ERF10 M06562_2.00	Arabidopsis thaliana	NNHNNHNHHDYCGCCGCCRYN	NRYGGCGGCGRHDDNDNNDNN	Dap-seq OMalley et al.(2016) ERF10_col_a	0.721	0.760
ERF10 M06563_2.00	Arabidopsis thaliana	HDSCGCCGCCRHHDNNNNNN	NNNNNNHDDYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF10_colamp_a	0.721	0.760
Q84J59_MAIZE M09717_2.00	Zea mays	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BD1_01	0.718	0.660
ERF086 M06663_2.00	Arabidopsis thaliana	HHDYCKCCGCCGYHD	HDRCGGCGGMGRHDD	Dap-seq OMalley et al.(2016) PUCHI_col_a	0.714	0.680
ERF086 M06664_2.00	Arabidopsis thaliana	NNNNHDHCKCCGCCGYHDHHDHNNN	NNNDHDDHDRCGGCGGMGDHDNNNN	Dap-seq OMalley et al.(2016) PUCHI_colamp_a	0.714	0.680
ERF11 M01606_2.00	Arabidopsis thaliana	NHGCCGNHNN	NNDNCGGCDN	PBM Weirauch et al.(2014) pTH8117	0.713	0.740
ERF11 M06575_2.00	Arabidopsis thaliana	NHNNHDSCGCCGYCRHHNNN	NNNDDYGRCGGCGSHDNNDN	Dap-seq OMalley et al.(2016) ERF11_colamp_a	0.713	0.740
ERF11 M06576_2.00	Arabidopsis thaliana	NHNYCKCCGCCGYHD	HDRCGGCGGMGRNDN	Dap-seq OMalley et al.(2016) ERF11_col_b	0.713	0.740
CRF2 M01622_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8680	0.711	0.680
CRF3 M01633_2.00	Arabidopsis thaliana	NNGCCRNNN	NNNYGGCNN	PBM Weirauch et al.(2014) pTH8110	0.704	0.660
Q7Y1W2_TOBAC M09735_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CEF1_01	0.703	0.700
Q5Y836_TOBAC M09732_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF5_02	0.703	0.720
RAP2-3 M01050_2.00	Arabidopsis thaliana	CGCCGCCR	YGGCGGCG	PBM Sullivan et al.(2014) pTH8811	0.703	0.700
RAP2-3 M00847_2.00	Arabidopsis thaliana	NMGCCGCCDN	NHGGCGGCKN	PBM Franco-Zorrilla et al.(2014) RAP2.3	0.703	0.700
ERF096 M01630_2.00	Arabidopsis thaliana	NVGCCGNCNN	NNGNCGGCBN	PBM Weirauch et al.(2014) pTH7909	0.702	0.720
ERF087 M06573_2.00	Arabidopsis thaliana	HHDYCKCCGCCGYYD	HRRCGGCGGMGRHDD	Dap-seq OMalley et al.(2016) AT1G28160_col_a	0.701	0.700
ERF087 M06574_2.00	Arabidopsis thaliana	HDYCKCCGCCGYCR	YGRCGGCGGMGRHD	Dap-seq OMalley et al.(2016) AT1G28160_colamp_a	0.701	0.700
LOC_Os08g36920 M01634_2.00	Oryza sativa	NNNGSCGHNN	NNDCGSCNNN	PBM Weirauch et al.(2014) pTH8596	0.701	0.720
PK17878.1 M01099_2.00	Cannabis sativa	CGCCGYCR	YGRCGGCG	PBM Lambert et al.(2019) pTH10133	0.700	0.720
RAP2-12 M01046_2.00	Arabidopsis thaliana	RSMGBMNNNN	NNNNKVCKSY	PBM Sullivan et al.(2014) pTH7359	0.700	0.700
RAP2-12 M06588_2.00	Arabidopsis thaliana	NHDCCGCCGCCRHHDHNNNHN	NDNNNDHDDYGGCGGCGGHDN	Dap-seq OMalley et al.(2016) RAP212_col_a	0.700	0.700
HRE1 M06595_2.00	Arabidopsis thaliana	NHNBMDCCGCCGCCRYHDHHN	NDDHDRYGGCGGCGGHKVNDN	Dap-seq OMalley et al.(2016) ERF73_col_a	0.699	0.680
HRE1 M06596_2.00	Arabidopsis thaliana	HNYHDMHNYCDCCGCCGCCRY	RYGGCGGCGGHGRNDKHDRND	Dap-seq OMalley et al.(2016) ERF73_colamp_a	0.699	0.680
ERF091 M06638_2.00	Arabidopsis thaliana	NNHNYHDCCGCCGCCRY	RYGGCGGCGGHDRNDNN	Dap-seq OMalley et al.(2016) AT4G18450_col_a	0.697	0.720
O65242_TOBAC M09730_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TSI1_01	0.696	0.680
Q2TN80_WHEAT M09715_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_02	0.695	0.640
AT2G33710 M01613_2.00	Arabidopsis thaliana	NSMGCCGHMN	NKDCGGCKSN	PBM Weirauch et al.(2014) pTH7543	0.692	0.740
AT2G33710 M06606_2.00	Arabidopsis thaliana	DBCGCCGCCGYHDHHDNH	DNHDDHDRCGGCGGCGVH	Dap-seq OMalley et al.(2016) At2g33710_colamp_a	0.692	0.740
AT2G33710 M06607_2.00	Arabidopsis thaliana	NHDYCKCCGCCGYMD	HKRCGGCGGMGRHDN	Dap-seq OMalley et al.(2016) At2g33710_col	0.692	0.740
ERF105 M01632_2.00	Arabidopsis thaliana	CGCCGGCM	KGCCGGCG	PBM Weirauch et al.(2014) pTH7233	0.692	0.720
ERF105 M06676_2.00	Arabidopsis thaliana	NHNNNNNNNNHNNHDBCGCCGCCR	YGGCGGCGVHDNNDNNNNNNNNDN	Dap-seq OMalley et al.(2016) ERF105_colamp_a	0.692	0.720
ERF105 M06677_2.00	Arabidopsis thaliana	HDSCGCCGCCRYHDH	DHDRYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF105_col	0.692	0.720
ERF104 M06682_2.00	Arabidopsis thaliana	NNHHDYMDCCGCCGCCRYH	DRYGGCGGCGGHKRHDDNN	Dap-seq OMalley et al.(2016) ERF104_col_a	0.692	0.680
ERF104 M06683_2.00	Arabidopsis thaliana	BHDSCGCCGCCRYHD	HDRYGGCGGCGSHDV	Dap-seq OMalley et al.(2016) ERF104_colamp_a	0.692	0.680
CRF4 M01626_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8261	0.691	0.680
CRF4 M06645_2.00	Arabidopsis thaliana	BMDCCGCCGCCRCHDHHDCYN	NRGHDDHDGYGGCGGCGGHKV	Dap-seq OMalley et al.(2016) CRF4_col_a	0.691	0.680
CRF4 M06646_2.00	Arabidopsis thaliana	YCDYCGCCGCCGYYD	HRRCGGCGGCGRHGR	Dap-seq OMalley et al.(2016) CRF4_colamp_a	0.691	0.680
EREBP1 M09708_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$EREBP1_01	0.689	0.660
0100010458 M01644_2.00	Ostreococcus tauri	MGCCGSCR	YGSCGGCK	PBM Weirauch et al.(2014) pTH9447	0.689	0.680
ERF5 M00721_2.00	Arabidopsis thaliana	NNNGSMRNMN	NKNYKSCNNN	PBM Chang et al.(2013) pTH7197	0.688	0.760
ERF5 M06674_2.00	Arabidopsis thaliana	YCDYCKCCGCCGYCD	HGRCGGCGGMGRHGR	Dap-seq OMalley et al.(2016) ERF5_col_a	0.688	0.760
ERF5 M06675_2.00	Arabidopsis thaliana	NHDBCGCCGCCRYHDNHDNNN	NNNHDNHDRYGGCGGCGVHDN	Dap-seq OMalley et al.(2016) ERF5_colamp_a	0.688	0.760
ERF113 M01629_2.00	Arabidopsis thaliana	NNGCCGHHNN	NNDDCGGCNN	PBM Weirauch et al.(2014) pTH8097	0.683	0.700
ERF2_TOBAC M09727_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF2_01	0.677	0.700
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GLYMA18G10290.1	AP2	26	77	PRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDTAEEAARAYDTAARTLRGP

Links
Other AP2 family TFs
Other *Glycine max* TFs

1733 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
cassava26894.m1	Manihot esculenta	cassava26894.m1	N
cassava6764.valid.m1	Manihot esculenta	cassava6764.valid.m1	I
Ca_22597	Cicer arietinum	Ca_22597	N
chr3.LjT47O18.40.nc	Lotus japonicus	chr3.LjT47O18.40.nc	N
chr3.LjT47O18.60.nc	Lotus japonicus	chr3.LjT47O18.60.nc	N
chr3.LjT47O18.70.nc	Lotus japonicus	chr3.LjT47O18.70.nc	N
Ciclev10016303m.g	Citrus clementina	Ciclev10016303m.g	I
Ciclev10017679m.g	Citrus clementina	Ciclev10017679m.g	I
Eucgr.A01766	Eucalyptus grandis	Eucgr.A01766	I
evm.TU.supercontig_34.62	Carica papaya	evm.TU.supercontig_34.62	N
gene01998-v1.0-hybrid	Fragaria vesca	gene01998-v1.0-hybrid	N
GLYMA06G45520	Glycine max	GLYMA06G45520	N
GLYMA06G45540	Glycine max	GLYMA06G45540	N
GLYMA06G45547	Glycine max	GLYMA06G45547	N
GLYMA06G45554	Glycine max	GLYMA06G45554	I
GLYMA12G11330	Glycine max	GLYMA12G11330	I
GLYMA12G11340	Glycine max	GLYMA12G11340	N
GLYMA12G11390	Glycine max	GLYMA12G11390	N
GLYMA12G11490	Glycine max	GLYMA12G11490	N
GLYMA12G32530	Glycine max	GLYMA12G32530	I
GLYMA12G32541	Glycine max	GLYMA12G32541	N
GLYMA13G37903	Glycine max	GLYMA13G37903	I
Gorai.002G016800	Gossypium raimondii	Gorai.002G016800	I
Gorai.005G206800	Gossypium raimondii	Gorai.005G206800	N
Gorai.012G132400	Gossypium raimondii	Gorai.012G132400	I
Gorai.013G071600	Gossypium raimondii	Gorai.013G071600	I
Gorai.013G072900	Gossypium raimondii	Gorai.013G072900	I
GSMUA_Achr11G22820_001	Musa acuminata	GSMUA_Achr11G22820_001	I
Lus10018547.g	Linum usitatissimum	Lus10018547.g	N
Lus10031607.g	Linum usitatissimum	Lus10031607.g	N
Lus10033738.g	Linum usitatissimum	Lus10033738.g	N
Lus10039734.g	Linum usitatissimum	Lus10039734.g	I
Lus10039735.g	Linum usitatissimum	Lus10039735.g	I
Lus10039772.g	Linum usitatissimum	Lus10039772.g	N
MDP0000155426	Malus domestica	MDP0000155426	I
MDP0000407613	Malus domestica	MDP0000407613	N
MTR_0008s0470	Medicago truncatula	MTR_0008s0470	N
MTR_0251s0050	Medicago truncatula	MTR_0251s0050	N
MTR_2g089420	Medicago truncatula	MTR_2g089420	N
MTR_2g089450	Medicago truncatula	MTR_2g089450	N
orange1.1g024860m.g	Citrus sinensis	orange1.1g024860m.g	I
orange1.1g037956m.g	Citrus sinensis	orange1.1g037956m.g	N
PGSC0003DMG400013752	Solanum tuberosum	PGSC0003DMG400013752	N
PGSC0003DMG400015087	Solanum tuberosum	PGSC0003DMG400015087	N
PK24260.1	Cannabis sativa	PK24260.1	N
Pm015302	Prunus mume	Pm015302	N
POPTR_0013s14560	Populus trichocarpa	POPTR_0013s14560	I
POPTR_0019s14120	Populus trichocarpa	POPTR_0019s14120	I
POPTR_0019s14140	Populus trichocarpa	POPTR_0019s14140	N
PRUPE_ppa026553mg	Prunus persica	PRUPE_ppa026553mg	N
SapurV1A.0048s0160	Salix purpurea	SapurV1A.0048s0160	N
SapurV1A.0417s0130	Salix purpurea	SapurV1A.0417s0130	I
SapurV1A.0417s0140	Salix purpurea	SapurV1A.0417s0140	N
SapurV1A.0417s0150	Salix purpurea	SapurV1A.0417s0150	I
Solyc03g093940.1	Solanum lycopersicum	Solyc03g093940.1	N
Solyc07g054980.1	Solanum lycopersicum	Solyc07g054980.1	I
Solyc12g005640.1	Solanum lycopersicum	Solyc12g005640.1	N
TCM_007865	Theobroma cacao	TCM_007865	I
TCM_007868	Theobroma cacao	TCM_007868	I
TCM_030020	Theobroma cacao	TCM_030020	I
VIT_00s0203g00170	Vitis vinifera	VIT_00s0203g00170	N
VIT_12s0134g00480	Vitis vinifera	VIT_12s0134g00480	I
VIT_12s0134g00490	Vitis vinifera	VIT_12s0134g00490	I

GLYMA18G10290 (Glycine max) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1733 Related TFs

GLYMA18G10290 **(Glycine max)
AP2**