OBART09G16810 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART09G16810 T003172_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M09710_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_01 		0.924 0.981
DREB1A
M09711_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SED_Q2 		0.924 0.981
Q8GZQ2_MAIZE
M09720_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_02 		0.706 0.774
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART09G16810.1 AP2 31 84

Links

Other AP2 family TFs
Other Oryza barthii TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29851.m002498 Ricinus communis 29851.m002498 I 0.000
Bo1g115980 Brassica oleracea Bo1g115980 I 0.000
Bo3g071890 Brassica oleracea Bo3g071890 I 0.000
Bo5g116790 Brassica oleracea Bo5g116790 I 0.000
Bostr.19424s0762 Boechera stricta Bostr.19424s0762 I 0.000
Bra001729 Brassica rapa Bra001729 I 0.000
Bra022376 Brassica rapa Bra022376 I 0.000
Bra037544 Brassica rapa Bra037544 I 0.000
Cagra.5105s0003 Capsella grandiflora Cagra.5105s0003 I 0.000
Carubv10015637m.g Capsella rubella Carubv10015637m.g I 0.000
cassava29880.valid.m1 Manihot esculenta cassava29880.valid.m1 I 0.000
Ca_14825 Cicer arietinum Ca_14825 N 0.000
chr2.CM0262.200.nc Lotus japonicus chr2.CM0262.200.nc I 0.000
chr2.CM0308.470.nd Lotus japonicus chr2.CM0308.470.nd I 0.000
Ciclev10028642m.g Citrus clementina Ciclev10028642m.g I 0.000
Cla010445 Citrullus lanatus Cla010445 I 0.000
evm.TU.supercontig_62.76 Carica papaya evm.TU.supercontig_62.76 I 0.000
gene31955-v1.0-hybrid Fragaria vesca gene31955-v1.0-hybrid I 0.000
GLYMA07G21160 Glycine max GLYMA07G21160 I 0.000
GLYMA11G13210 Glycine max GLYMA11G13210 N 0.000
GLYMA12G05250 Glycine max GLYMA12G05250 N 0.000
GLYMA20G01130 Glycine max GLYMA20G01130 N 0.000
Gorai.002G006500 Gossypium raimondii Gorai.002G006500 I 0.000
Gorai.005G240900 Gossypium raimondii Gorai.005G240900 I 0.000
Gorai.012G150900 Gossypium raimondii Gorai.012G150900 I 0.000
Gorai.013G040000 Gossypium raimondii Gorai.013G040000 I 0.000
Lus10012041.g Linum usitatissimum Lus10012041.g N 0.000
MDP0000238744 Malus domestica MDP0000238744 N 0.000
MDP0000555456 Malus domestica MDP0000555456 N 0.000
MTR_1g034240 Medicago truncatula MTR_1g034240 N 0.000
orange1.1g016655m.g Citrus sinensis orange1.1g016655m.g I 0.000
PK10791.1 Cannabis sativa PK10791.1 I 0.000
Pm021537 Prunus mume Pm021537 N 0.000
POPTR_0004s15400 Populus trichocarpa POPTR_0004s15400 I 0.000
POPTR_0009s11170 Populus trichocarpa POPTR_0009s11170 I 0.000
PRUPE_ppa006275mg Prunus persica PRUPE_ppa006275mg I 0.000
SapurV1A.0090s0340 Salix purpurea SapurV1A.0090s0340 I 0.000
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I 0.000
SapurV1A.2089s0010 Salix purpurea SapurV1A.2089s0010 I 0.000
TCM_006971 Theobroma cacao TCM_006971 I 0.000
Thhalv10021075m.g Eutrema salsugineum Thhalv10021075m.g I 0.000
VRN1 Arabidopsis lyrata fgenesh2_kg.3__2116__AT3G18990.1 I 0.000
VRN1 Arabidopsis thaliana AT3G18990 D 0.000