HLF (Ochotona princeps)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSOPRG00000004195 T060821_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.896 1.000
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.896 1.000
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.896 1.000
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.896 1.000
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.896 1.000
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.896 1.000
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.896 1.000
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.896 1.000
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.847 0.794
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.847 0.794
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.847 0.794
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.847 0.794
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.847 0.794
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.847 0.794
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.847 0.794
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.847 0.794
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.847 0.794
Pdp1
M03645_2.00 		Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB		 SELEX
Nitta et al.(2015)
Pdp1_1 		0.795 0.683
Pdp1
M03646_2.00 		Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY		 SELEX
Nitta et al.(2015)
Pdp1_2 		0.795 0.683
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000003850 bZIP 222 284

Links

Other bZIP family TFs
Other Ochotona princeps TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004641 Ricinus communis 29929.m004641 I
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I
BGIOSGA007643 Oryza indica BGIOSGA007643 N
BGIOSGA020731 Oryza indica BGIOSGA020731 N
Bo7g065290 Brassica oleracea Bo7g065290 N
Bo9g058970 Brassica oleracea Bo9g058970 N
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N
Bra027478 Brassica rapa Bra027478 N
Bra033671 Brassica rapa Bra033671 N
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N
Carubv10026434m.g Capsella rubella Carubv10026434m.g N
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N
Ca_11356 Cicer arietinum Ca_11356 I
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I
F775_31908 Aegilops tauschii F775_31908 N
GLYMA11G36980 Glycine max GLYMA11G36980 N
GLYMA18G00903 Glycine max GLYMA18G00903 N
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N
GRMZM2G065451 Zea mays GRMZM2G065451 N
GRMZM2G097275 Zea mays GRMZM2G097275 N
GRMZM2G126827 Zea mays GRMZM2G126827 N
GRMZM2G156621 Zea mays GRMZM2G156621 N
GRMZM2G163813 Zea mays GRMZM2G163813 N
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N
LPERR02G02980 Leersia perrieri LPERR02G02980 N
LPERR02G04880 Leersia perrieri LPERR02G04880 N
LPERR06G19770 Leersia perrieri LPERR06G19770 N
LPERR06G22200 Leersia perrieri LPERR06G22200 N
Lus10006411.g Linum usitatissimum Lus10006411.g I
Lus10011356.g Linum usitatissimum Lus10011356.g I
Lus10021614.g Linum usitatissimum Lus10021614.g N
MDP0000155354 Malus domestica MDP0000155354 N
mgf010397m Mimulus guttatus mgf010397m N
mgf019346m Mimulus guttatus mgf019346m I
MLOC_11199 Hordeum vulgare MLOC_11199 N
MLOC_62426 Hordeum vulgare MLOC_62426 N
MTR_3g085180 Medicago truncatula MTR_3g085180 N
OB02G12930 Oryza brachyantha OB02G12930 N
OB02G14840 Oryza brachyantha OB02G14840 N
OB06G31550 Oryza brachyantha OB06G31550 N
OB06G34330 Oryza brachyantha OB06G34330 N
OBART02G03260 Oryza barthii OBART02G03260 N
OBART06G23820 Oryza barthii OBART06G23820 N
OBART06G26610 Oryza barthii OBART06G26610 N
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N
OGLUM06G25070 Oryza glumaepatula OGLUM06G25070 N
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N
OLONG_012160 Oryza longistaminata OLONG_012160 N
OLONG_025693 Oryza longistaminata OLONG_025693 N
OMERI02G03900 Oryza meridionalis OMERI02G03900 N
OMERI02G06420 Oryza meridionalis OMERI02G06420 N
OMERI06G23750 Oryza meridionalis OMERI06G23750 N
OMERI06G26720 Oryza meridionalis OMERI06G26720 N
ONIVA02G03070 Oryza nivara ONIVA02G03070 N
ONIVA02G05960 Oryza nivara ONIVA02G05960 N
ONIVA06G27990 Oryza nivara ONIVA06G27990 N
ONIVA06G29160 Oryza nivara ONIVA06G29160 N
OPUNC02G02570 Oryza punctata OPUNC02G02570 N
OPUNC02G04800 Oryza punctata OPUNC02G04800 N
OPUNC06G24320 Oryza punctata OPUNC06G24320 N
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N
ORGLA06G0199900 Oryza glaberrima ORGLA06G0199900 N
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N
ORUFI06G25590 Oryza rufipogon ORUFI06G25590 N
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N
OS02G0139400 Oryza sativa OS02G0139400 N
Pavir.Aa03225 Panicum virgatum Pavir.Aa03225 N
Pavir.Ab00358 Panicum virgatum Pavir.Ab00358 N
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N
Pavir.J20730 Panicum virgatum Pavir.J20730 N
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N
PK16953.1 Cannabis sativa PK16953.1 N
Pm007020 Prunus mume Pm007020 N
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I
Sb04g003175 Sorghum bicolor Sb04g003175 N
Sb04g004940 Sorghum bicolor Sb04g004940 N
Sb10g029190 Sorghum bicolor Sb10g029190 N
Si017520m.g Setaria italica Si017520m.g N
Solyc04g045560.2 Solanum lycopersicum Solyc04g045560.2 N
SPL11 Oryza sativa OS06G0663500 N
SPL12 Oryza indica BGIOSGA020577 N
SPL12 Oryza sativa OS06G0703500 N
SPL2 Arabidopsis thaliana AT5G43270 N
SPL2 Arabidopsis lyrata scaffold_800740.1 N
SPL3 Oryza indica BGIOSGA007499 N
SPL4 Oryza sativa OS02G0174100 N
TCM_008772 Theobroma cacao TCM_008772 N
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N
TRIUR3_09477 Triticum urartu TRIUR3_09477 N
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I