CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FBXL19
(
Equus caballus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSECAG00000018851
T167948_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.915
0.915
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000016425
CxxC
11
57
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Equus caballus
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29729.m002292
Ricinus communis
29729.m002292
I
0.000
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.000
BGIOSGA002846
Oryza indica
BGIOSGA002846
I
0.000
Bo4g190040
Brassica oleracea
Bo4g190040
I
0.000
Bo9g155940
Brassica oleracea
Bo9g155940
I
0.000
Bo9g177130
Brassica oleracea
Bo9g177130
I
0.000
Bostr.26527s0367
Boechera stricta
Bostr.26527s0367
I
0.000
Bra002159
Brassica rapa
Bra002159
I
0.000
Bra017011
Brassica rapa
Bra017011
I
0.000
BRADI2G04000
Brachypodium distachyon
BRADI2G04000
I
0.000
Cagra.0712s0008
Capsella grandiflora
Cagra.0712s0008
I
0.000
Carubv10002425m.g
Capsella rubella
Carubv10002425m.g
I
0.000
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
0.000
Ciclev10032029m.g
Citrus clementina
Ciclev10032029m.g
I
0.000
Cla006713
Citrullus lanatus
Cla006713
I
0.000
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.000
DREB2A
Oryza sativa
OS01G0165000
I
0.000
DREB2G
Arabidopsis thaliana
AT5G18450
D
0.000
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
0.000
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
0.000
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.000
evm.TU.supercontig_51.23
Carica papaya
evm.TU.supercontig_51.23
I
0.000
F775_05774
Aegilops tauschii
F775_05774
I
0.000
gene01985-v1.0-hybrid
Fragaria vesca
gene01985-v1.0-hybrid
I
0.000
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.000
Gorai.011G235900
Gossypium raimondii
Gorai.011G235900
I
0.000
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
0.000
GSMUA_Achr5G28050_001
Musa acuminata
GSMUA_Achr5G28050_001
I
0.000
GSMUA_Achr6G32780_001
Musa acuminata
GSMUA_Achr6G32780_001
I
0.000
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
0.000
GSMUA_AchrUn_randomG08690_001
Musa acuminata
GSMUA_AchrUn_randomG08690_001
I
0.000
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.000
LPERR01G03760
Leersia perrieri
LPERR01G03760
I
0.000
Lus10012226.g
Linum usitatissimum
Lus10012226.g
I
0.000
Lus10023633.g
Linum usitatissimum
Lus10023633.g
I
0.000
Lus10034902.g
Linum usitatissimum
Lus10034902.g
I
0.000
MDP0000147009
Malus domestica
MDP0000147009
I
0.000
MDP0000153866
Malus domestica
MDP0000153866
I
0.000
MDP0000165880
Malus domestica
MDP0000165880
I
0.000
MDP0000290585
Malus domestica
MDP0000290585
I
0.000
MDP0000446783
Malus domestica
MDP0000446783
I
0.000
MDP0000880312
Malus domestica
MDP0000880312
I
0.000
mgf017629m
Mimulus guttatus
mgf017629m
I
0.000
MLOC_66686
Hordeum vulgare
MLOC_66686
I
0.000
MTR_5g083330
Medicago truncatula
MTR_5g083330
I
0.000
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.000
OB01G13930
Oryza brachyantha
OB01G13930
I
0.000
OBART01G04210
Oryza barthii
OBART01G04210
I
0.000
OGLUM01G04560
Oryza glumaepatula
OGLUM01G04560
I
0.000
OLONG_014228
Oryza longistaminata
OLONG_014228
I
0.000
OMERI01G04110
Oryza meridionalis
OMERI01G04110
I
0.000
ONIVA01G04630
Oryza nivara
ONIVA01G04630
I
0.000
OPUNC01G03970
Oryza punctata
OPUNC01G03970
I
0.000
orange1.1g019546m.g
Citrus sinensis
orange1.1g019546m.g
I
0.000
ORGLA01G0037700
Oryza glaberrima
ORGLA01G0037700
I
0.000
ORUFI01G04360
Oryza rufipogon
ORUFI01G04360
I
0.000
Pavir.Ea00429
Panicum virgatum
Pavir.Ea00429
I
0.000
Pavir.J37967
Panicum virgatum
Pavir.J37967
I
0.000
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.000
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
0.000
PGSC0003DMG400028700
Solanum tuberosum
PGSC0003DMG400028700
I
0.000
PK07402.1
Cannabis sativa
PK07402.1
D
0.000
PK07829.1
Cannabis sativa
PK07829.1
I
0.000
Pm015262
Prunus mume
Pm015262
I
0.000
Pm018989
Prunus mume
Pm018989
I
0.000
POPTR_0008s07360
Populus trichocarpa
POPTR_0008s07360
I
0.000
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.000
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.000
PRUPE_ppa022733mg
Prunus persica
PRUPE_ppa022733mg
I
0.000
PRUPE_ppa022996mg
Prunus persica
PRUPE_ppa022996mg
I
0.000
Q8H769_WHEAT
Triticum aestivum
Q8H769_WHEAT
D
0.000
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
0.000
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.000
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
0.000
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.000
scaffold_601912.1
Arabidopsis lyrata
scaffold_601912.1
I
0.000
SELMODRAFT_105485
Selaginella moellendorffii
SELMODRAFT_105485
I
0.000
SELMODRAFT_38502
Selaginella moellendorffii
SELMODRAFT_38502
I
0.000
Si002067m.g
Setaria italica
Si002067m.g
I
0.000
Solyc04g050750.1
Solanum lycopersicum
Solyc04g050750.1
I
0.000
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
0.000
TCM_043302
Theobroma cacao
TCM_043302
I
0.000
TCM_043306
Theobroma cacao
TCM_043306
I
0.000
Thhalv10015907m.g
Eutrema salsugineum
Thhalv10015907m.g
I
0.000
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.000
TRAES3BF064700080CFD_g
Triticum aestivum
TRAES3BF064700080CFD_g
I
0.000
Traes_3AS_62742A0471
Triticum aestivum
Traes_3AS_62742A0471
I
0.000
Traes_5BL_7F0FD1538
Triticum aestivum
Traes_5BL_7F0FD1538
I
0.000
TRIUR3_17973
Triticum urartu
TRIUR3_17973
I
0.000
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.000