GCM2 (Pteropus vampyrus)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 ENSPVAG00000004876 T198051_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.919 0.919
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.919 0.919
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.919 0.919
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.919 0.919
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.844 0.844
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.822 0.822
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.815 0.815
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.696 0.696
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.696 0.696
GCM1
M02021_2.00 		Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB		 PBM
Weirauch et al.(2014)
pTH8653 		0.689 0.689
XP_004449939.1
M02027_2.00 		Dasypus novemcinctus
RTRSGGGY
RCCCSYAY		 PBM
Weirauch et al.(2014)
pTH9259 		0.689 0.689
GCM1
M02020_2.00 		Homo sapiens
NVTVNGGGN
NCCCNBABN		 PBM
Weirauch et al.(2014)
pTH7965 		0.681 0.681
GCM1
M03068_2.00 		Homo sapiens
BATGCGGGTR
YACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_1 		0.681 0.681
GCM1
M03069_2.00 		Homo sapiens
RTRYKGGYRCCMGYAN
NTRCKGGYRCCMRYAY		 SELEX
Jolma et al.(2013)
GCM1_2 		0.681 0.681
GCM1
M03070_2.00 		Homo sapiens
BATGCGGGTRS
SYACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_3 		0.681 0.681
GCM1
M04883_2.00 		Homo sapiens
RTGSGGGBV
BVCCCSCAY		 SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX 		0.681 0.681
GCM1
M05868_2.00 		Homo sapiens
ATGCGGGYV
BRCCCGCAT		 SMiLE-seq
Isakova et al.(2017)
GCM1 		0.681 0.681
GCM1
M10603_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMA_Q4 		0.681 0.681
GCM1
M10604_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCM_Q2 		0.681 0.681
GCM1
M04884_2.00 		Homo sapiens
ATRNKGGYV
BRCCMNYAT		 SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX 		0.681 0.681
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.644 0.644
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.644 0.644
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.644 0.644
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.637 0.637
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.637 0.637
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.637 0.637
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.637 0.637
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000004616 GCM 35 169

Links

Other GCM family TFs
Other Pteropus vampyrus TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000623 Aedes aegypti AAEL000623 I 0.657
AALB008012 Anopheles albimanus AALB008012 I 0.614
AALB008013 Anopheles albimanus AALB008013 I 0.643
Aan_R001196 Calypte anna Aan_R001196 I 0.674
Aan_R001550 Calypte anna Aan_R001550 I 0.833
AARA011980 Anopheles arabiensis AARA011980 I 0.636
AATE008476 Anopheles atroparvus AATE008476 I 0.636
ACEP23384 Atta cephalotes ACEP23384 I 0.643
ACHR001414 Anopheles christyi ACHR001414 I 0.650
ACOM031025 Anopheles coluzzii ACOM031025 I 0.655
ACUA009622 Anopheles culicifacies ACUA009622 I 0.643
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.629
ADAC002327 Anopheles darlingi ADAC002327 I 0.636
ADIR000711 Anopheles dirus ADIR000711 I 0.643
AEPI007160 Anopheles epiroticus AEPI007160 I 0.650
AFAF005680 Anopheles farauti AFAF005680 I 0.659
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.681
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.826
AFUN009837 Anopheles funestus AFUN009837 I 0.643
AGAP007783 Anopheles gambiae AGAP007783 I 0.643
Alligator_sinensis_CCG000160.1 Alligator sinensis Alligator_sinensis_CCG000160.1 I 0.608
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.797
AMAM003661 Anopheles maculatus AMAM003661 I 0.643
AMAM005757 Anopheles maculatus AMAM005757 I 0.624
AMEC020313 Anopheles melas AMEC020313 I 0.621
AMEM005966 Anopheles merus AMEM005966 I 0.655
AMIN006368 Anopheles minimus AMIN006368 I 0.643
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.643
ASIS002985 Anopheles sinensis ASIS002985 I 0.636
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.643
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.650
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.674
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.812
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.636
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.650
CLEC013329 Cimex lectularius CLEC013329 I 0.621
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.833
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.629
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.629
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.621
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.678
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.935
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.659
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.815
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.833
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.674
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.667
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.681
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.913
ENSCSAG00000013148 Chlorocebus sabaeus ENSCSAG00000013148 I 0.667
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.674
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.819
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.790
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.667
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.790
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.790
ENSLOCG00000016883 Lepisosteus oculatus ENSLOCG00000016883 I 0.659
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.667
ENSMICG00000002274 Microcebus murinus ENSMICG00000002274 I 0.645
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.899
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.935
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.659
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.906
ENSNLEG00000003544 Nomascus leucogenys ENSNLEG00000003544 I 0.667
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.667
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.884
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.812
ENSP00000259803 Macaca fascicularis ENSP00000259803 I 0.667
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.913
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.913
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.913
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.804
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.710
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.906
ENSPPYG00000016719 Pongo abelii ENSPPYG00000016719 I 0.667
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.841
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.696
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.848
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.667
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.659
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.877
ENSSTOG00000014763 Ictidomys tridecemlineatus ENSSTOG00000014763 I 0.632
ENSSTOG00000022342 Ictidomys tridecemlineatus ENSSTOG00000022342 I 0.652
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.689
ENSTRUG00000001670 Takifugu rubripes ENSTRUG00000001670 I 0.828
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.822
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.674
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.906
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.812
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.621
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.614
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.621
GB45031 Apis mellifera GB45031 I 0.643
gcm Drosophila melanogaster FBgn0014179 D 0.614
GCM1 Bos taurus ENSBTAG00000008148 I 0.667
GCM1 Canis familiaris ENSCAFG00000002273 I 0.659
GCM1 Callithrix jacchus ENSCJAG00000011189 I 0.667
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.679
Gcm1 Dipodomys ordii ENSDORG00000003627 I 0.657
GCM1 Equus caballus ENSECAG00000014228 I 0.674
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.686
GCM1 Felis catus ENSFCAG00000009490 I 0.659
GCM1 Homo sapiens ENSG00000137270 D 0.667
GCM1 Gallus gallus ENSGALG00000016316 I 0.674
GCM1 Gorilla gorilla ENSGGOG00000006527 I 0.667
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.659
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.689
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.652
GCM1 Macaca mulatta ENSMMUG00000022083 I 0.667
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.667
Gcm1 Mus musculus ENSMUSG00000023333 D 0.681
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.682
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.667
GCM1 Ochotona princeps ENSOPRG00000003290 I 0.653
GCM1 Pan troglodytes ENSPTRG00000018288 I 0.667
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.659
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.681
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.652
GCM1 Vicugna pacos ENSVPAG00000006379 I 0.647
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.645
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.783
GCM2 Bos taurus ENSBTAG00000018787 I 0.906
GCM2 Canis familiaris ENSCAFG00000009747 I 0.935
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.928
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.919
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.884
gcm2 Danio rerio ENSDARG00000045413 I 0.797
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.928
GCM2 Equus caballus ENSECAG00000017632 I 0.948
GCM2 Erinaceus europaeus ENSEEUG00000005577 I 0.670
GCM2 Echinops telfairi ENSETEG00000012473 I 0.873
GCM2 Felis catus ENSFCAG00000001608 I 0.942
GCM2 Homo sapiens ENSG00000124827 D 0.899
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.804
GCM2 Gallus gallus ENSGALG00000012768 I 0.826
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.899
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.919
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.819
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.928
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.913
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.855
Gcm2 Mus musculus ENSMUSG00000021362 I 0.906
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.837
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.911
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.911
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.877
gcm2 Oryzias latipes ENSORLG00000019715 I 0.797
GCM2 Procavia capensis ENSPCAG00000011887 I 0.855
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.899
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.906
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.884
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.826
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.797
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.920
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.920
gcm2 Drosophila melanogaster FBgn0019809 D 0.621
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.790
gcm2.S Xenopus laevis XB-GENE-866131 I 0.783
GE18856 Drosophila yakuba FBgn0236239 I 0.621
GF21907 Drosophila ananassae FBgn0098907 I 0.614
GF22779 Drosophila ananassae FBgn0099773 I 0.621
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.826
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.674
GG10041 Drosophila erecta FBgn0102353 I 0.621
GI11073 Drosophila mojavensis FBgn0133835 I 0.614
GI17574 Drosophila mojavensis FBgn0140318 I 0.630
GJ17916 Drosophila virilis FBgn0205084 I 0.630
GJ18313 Drosophila virilis FBgn0205472 I 0.637
GL18919 Drosophila persimilis FBgn0156520 I 0.621
GL19218 Drosophila persimilis FBgn0156817 I 0.614
GM12386 Drosophila sechellia FBgn0167323 I 0.614
GM17569 Drosophila sechellia FBgn0172477 I 0.614
gw.943.3.1 Branchiostoma floridae gw.943.3.1 I 0.627
HMEL005671 Heliconius melpomene HMEL005671 I 0.650
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.636
ISCW022914 Ixodes scapularis ISCW022914 I 0.659
KGM_05743 Danaus plexippus KGM_05743 I 0.650
L798_07938 Zootermopsis nevadensis L798_07938 I 0.621
LCUP008083 Lucilia cuprina LCUP008083 I 0.621
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.650
MCINX011946 Melitaea cinxia MCINX011946 I 0.650
MDOA003644 Musca domestica MDOA003644 I 0.614
MDOA004732 Musca domestica MDOA004732 I 0.614
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.652
NV17454 Nasonia vitripennis NV17454 I 0.621
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.650
Ogr12931 Ophisaurus gracilis Ogr12931 I 0.697
PHUM436840 Pediculus humanus PHUM436840 I 0.629
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.629
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.688
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.783
RPRC001299 Rhodnius prolixus RPRC001299 I 0.621
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.615
SINV21711 Solenopsis invicta SINV21711 I 0.643
SMAR010130 Strigamia maritima SMAR010130 I 0.627
Tal_R009935 Tyto alba Tal_R009935 I 0.674
Tal_R009965 Tyto alba Tal_R009965 I 0.610
TC014730 Tribolium castaneum TC014730 I 0.664
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.650
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.679
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.657