GRHL1 (Callithrix jacchus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSCJAG00000006431 T198932_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.986 0.986
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.986 0.986
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.986 0.986
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.986 0.986
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.986 0.986
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.732 0.732
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.732 0.732
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.732 0.732
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000011987 Grainyhead 230 442
ENSCJAP00000029277 Grainyhead 34 253

Links

Other Grainyhead family TFs
Other Callithrix jacchus TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29736.m002027 Ricinus communis 29736.m002027 N
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N
BGIOSGA022297 Oryza indica BGIOSGA022297 N
Bo7g080560 Brassica oleracea Bo7g080560 N
Bo8g066030 Brassica oleracea Bo8g066030 N
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N
Bra016702 Brassica rapa Bra016702 N
Bra024809 Brassica rapa Bra024809 N
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N
Carubv10010024m.g Capsella rubella Carubv10010024m.g N
Carubv10017841m.g Capsella rubella Carubv10017841m.g N
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N
Ca_24297 Cicer arietinum Ca_24297 N
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N
Cla022217 Citrullus lanatus Cla022217 N
Cucsa.005520 Cucumis sativus Cucsa.005520 N
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N
GLYMA08G40850 Glycine max GLYMA08G40850 N
GLYMA18G16200 Glycine max GLYMA18G16200 N
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N
GRMZM2G155662 Zea mays GRMZM2G155662 N
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N
LPERR06G02670 Leersia perrieri LPERR06G02670 N
Lus10036723.g Linum usitatissimum Lus10036723.g N
MDP0000268451 Malus domestica MDP0000268451 N
mgf002465m Mimulus guttatus mgf002465m N
MLOC_11586 Hordeum vulgare MLOC_11586 N
OBART06G03050 Oryza barthii OBART06G03050 N
OMERI06G03280 Oryza meridionalis OMERI06G03280 N
OMERI07G11550 Oryza meridionalis OMERI07G11550 N
ONIVA06G03980 Oryza nivara ONIVA06G03980 N
OPUNC06G02750 Oryza punctata OPUNC06G02750 N
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N
OS06G0145800 Oryza sativa OS06G0145800 N
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N
PK22670.1 Cannabis sativa PK22670.1 N
Pm006558 Prunus mume Pm006558 N
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N
Sb10g003170 Sorghum bicolor Sb10g003170 N
Si006951m.g Setaria italica Si006951m.g N
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N
TCM_011795 Theobroma cacao TCM_011795 N
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N
WHY1 Arabidopsis thaliana AT1G14410 N
WHY3 Arabidopsis thaliana AT2G02740 N