CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_4DS_2CE9E3235
(
Triticum aestivum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Traes_4DS_2CE9E3235
T201725_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_4DS_2CE9E3235.1
GRAS
307
672
LLTLLLQCAESVNSDDLDEAQRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPNASSPAASRLVNSRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFAHTLGLPFEFYPVAGKAGNLDPEKLGVDTRRREAVAVHWLHHSLYDVTGNDSNTLNLIQRLAPKVVTMVEQDLSHSGSFLARFVEAIHYYSALFDSLDASYSEDSSERHVVEQQLLAREIRNVLAVGGPARTGDIKFGNWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGTLKLGWKDLCLLTASAWR
Links
Other
GRAS
family TFs
Other
Triticum aestivum
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30073.m002204
Ricinus communis
30073.m002204
N
0.808
AMTR_s00077p00190160
Amborella trichopoda
AMTR_s00077p00190160
N
0.787
Aquca_004_00566
Aquilegia coerulea
Aquca_004_00566
N
0.808
BGIOSGA034703
Oryza indica
BGIOSGA034703
N
0.911
BGIOSGA036912
Oryza indica
BGIOSGA036912
N
0.911
Bo8g083500
Brassica oleracea
Bo8g083500
N
0.770
Bostr.0697s0034
Boechera stricta
Bostr.0697s0034
N
0.770
Cagra.0562s0013
Capsella grandiflora
Cagra.0562s0013
N
0.770
Carubv10016802m.g
Capsella rubella
Carubv10016802m.g
N
0.770
cassava25218.valid.m1
Manihot esculenta
cassava25218.valid.m1
N
0.813
cassava36326.valid.m1
Manihot esculenta
cassava36326.valid.m1
N
0.808
Ca_09530
Cicer arietinum
Ca_09530
N
0.795
chr1.CM1255.400.nc
Lotus japonicus
chr1.CM1255.400.nc
N
0.801
Ciclev10011085m.g
Citrus clementina
Ciclev10011085m.g
N
0.808
Cla012346
Citrullus lanatus
Cla012346
N
0.792
Cucsa.002880
Cucumis sativus
Cucsa.002880
N
0.789
Eucgr.K01320
Eucalyptus grandis
Eucgr.K01320
N
0.778
evm.TU.supercontig_1018.1
Carica papaya
evm.TU.supercontig_1018.1
N
0.806
F775_14336
Aegilops tauschii
F775_14336
N
0.878
gene13644-v1.0-hybrid
Fragaria vesca
gene13644-v1.0-hybrid
N
0.806
GLYMA09G40620
Glycine max
GLYMA09G40620
N
0.804
GLYMA18G45220
Glycine max
GLYMA18G45220
N
0.801
Gorai.005G001300
Gossypium raimondii
Gorai.005G001300
N
0.754
Gorai.006G236200
Gossypium raimondii
Gorai.006G236200
N
0.775
GRMZM2G015080
Zea mays
GRMZM2G015080
N
0.867
GRMZM2G131516
Zea mays
GRMZM2G131516
N
0.955
GSMUA_Achr8G09400_001
Musa acuminata
GSMUA_Achr8G09400_001
N
0.820
LPERR11G01220
Leersia perrieri
LPERR11G01220
N
0.938
LPERR12G01340
Leersia perrieri
LPERR12G01340
N
0.895
Lus10016496.g
Linum usitatissimum
Lus10016496.g
N
0.737
Lus10040734.g
Linum usitatissimum
Lus10040734.g
N
0.737
MDP0000397638
Malus domestica
MDP0000397638
N
0.814
mgf012242m
Mimulus guttatus
mgf012242m
N
0.787
MLOC_64716
Hordeum vulgare
MLOC_64716
N
0.886
MTR_7g074650
Medicago truncatula
MTR_7g074650
N
0.795
OB07G24850
Oryza brachyantha
OB07G24850
N
0.750
OBART11G01460
Oryza barthii
OBART11G01460
N
0.895
OBART12G01190
Oryza barthii
OBART12G01190
N
0.907
OGLUM11G01180
Oryza glumaepatula
OGLUM11G01180
N
0.907
OLONG_010321
Oryza longistaminata
OLONG_010321
N
0.787
OMERI06G09050
Oryza meridionalis
OMERI06G09050
N
0.764
orange1.1g014896m.g
Citrus sinensis
orange1.1g014896m.g
N
0.808
ORGLA11G0013300
Oryza glaberrima
ORGLA11G0013300
N
0.884
ORGLA12G0010300
Oryza glaberrima
ORGLA12G0010300
N
0.885
ORUFI11G01380
Oryza rufipogon
ORUFI11G01380
N
0.886
ORUFI12G01460
Oryza rufipogon
ORUFI12G01460
N
0.911
OS07G0567700
Oryza sativa
OS07G0567700
N
0.750
Pavir.Ha01915
Panicum virgatum
Pavir.Ha01915
N
0.846
Pavir.J08573
Panicum virgatum
Pavir.J08573
N
0.870
Pavir.J21588
Panicum virgatum
Pavir.J21588
N
0.896
PGSC0003DMG400016833
Solanum tuberosum
PGSC0003DMG400016833
N
0.809
PK22310.1
Cannabis sativa
PK22310.1
N
0.821
Pm002956
Prunus mume
Pm002956
N
0.817
POPTR_0006s11500
Populus trichocarpa
POPTR_0006s11500
N
0.802
POPTR_0016s15060
Populus trichocarpa
POPTR_0016s15060
N
0.806
PRUPE_ppa001546mg
Prunus persica
PRUPE_ppa001546mg
N
0.820
SapurV1A.0208s0090
Salix purpurea
SapurV1A.0208s0090
N
0.806
SapurV1A.1165s0100
Salix purpurea
SapurV1A.1165s0100
N
0.792
Sb05g001500
Sorghum bicolor
Sb05g001500
N
0.911
SCR
Arabidopsis thaliana
AT3G54220
N
0.770
SCR
Vitis vinifera
VIT_08s0056g00050
N
0.818
SCR
Arabidopsis lyrata
fgenesh2_kg.5__1811__AT3G54220.1
N
0.770
SCR1
Oryza sativa
OS11G0124300
N
0.911
SCR2
Oryza sativa
OS12G0122000
N
0.911
SELMODRAFT_432115
Selaginella moellendorffii
SELMODRAFT_432115
N
0.713
Solyc10g074680.1
Solanum lycopersicum
Solyc10g074680.1
N
0.812
TCM_017746
Theobroma cacao
TCM_017746
N
0.788
Thhalv10010179m.g
Eutrema salsugineum
Thhalv10010179m.g
N
0.767
Traes_4BS_A05D3DC53
Triticum aestivum
Traes_4BS_A05D3DC53
N
0.997
Traes_5BL_C02570726
Triticum aestivum
Traes_5BL_C02570726
N
0.898