CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_4BL_D44ACD58E
(
Triticum aestivum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Traes_4BL_D44ACD58E
T246188_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_4BL_D44ACD58E.1
LOB
17
61
SCNGCRVLRKGCADDCTIRPCLAWIRSPDAQANATVFLAKFYGRA
Links
Other
LOB
family TFs
Other
Triticum aestivum
TFs
216 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27524.m000293
Ricinus communis
27524.m000293
N
0.925
28207.m000107
Ricinus communis
28207.m000107
N
0.850
AMTR_s00137p00051070
Amborella trichopoda
AMTR_s00137p00051070
N
0.700
BGIOSGA001546
Oryza indica
BGIOSGA001546
N
0.900
BGIOSGA010258
Oryza indica
BGIOSGA010258
N
0.725
BGIOSGA010454
Oryza indica
BGIOSGA010454
N
0.775
BGIOSGA026049
Oryza indica
BGIOSGA026049
N
0.725
Bo1g003550
Brassica oleracea
Bo1g003550
N
0.700
Bo2g168020
Brassica oleracea
Bo2g168020
N
0.725
Bo3g055690
Brassica oleracea
Bo3g055690
N
0.925
Bo7g063630
Brassica oleracea
Bo7g063630
N
0.725
Bo7g099150
Brassica oleracea
Bo7g099150
N
0.700
Bo8g079200
Brassica oleracea
Bo8g079200
N
0.700
Bostr.0568s0168
Boechera stricta
Bostr.0568s0168
N
0.725
Bostr.26959s0040
Boechera stricta
Bostr.26959s0040
N
0.875
Bra012164
Brassica rapa
Bra012164
N
0.725
Bra012913
Brassica rapa
Bra012913
N
0.700
Bra021433
Brassica rapa
Bra021433
N
0.925
Bra031833
Brassica rapa
Bra031833
N
0.725
Bra036040
Brassica rapa
Bra036040
N
0.700
Bra037847
Brassica rapa
Bra037847
N
0.725
Cagra.0342s0030
Capsella grandiflora
Cagra.0342s0030
N
0.725
Cagra.10957s0002
Capsella grandiflora
Cagra.10957s0002
N
0.725
Cagra.4491s0014
Capsella grandiflora
Cagra.4491s0014
N
0.725
Carubv10000015m.g
Capsella rubella
Carubv10000015m.g
N
0.775
Carubv10002654m.g
Capsella rubella
Carubv10002654m.g
N
0.775
Carubv10005616m.g
Capsella rubella
Carubv10005616m.g
N
0.725
Carubv10017944m.g
Capsella rubella
Carubv10017944m.g
N
0.725
Carubv10027507m.g
Capsella rubella
Carubv10027507m.g
N
0.725
cassava22449.valid.m1
Manihot esculenta
cassava22449.valid.m1
N
0.725
cassava226.valid.m1
Manihot esculenta
cassava226.valid.m1
N
0.750
cassava60.valid.m1
Manihot esculenta
cassava60.valid.m1
N
0.850
Ca_09342
Cicer arietinum
Ca_09342
N
0.775
chr1.CM0088.550.nd
Lotus japonicus
chr1.CM0088.550.nd
N
0.700
chr4.CM0128.270.nc
Lotus japonicus
chr4.CM0128.270.nc
N
0.750
Ciclev10013705m.g
Citrus clementina
Ciclev10013705m.g
N
0.850
Ciclev10022068m.g
Citrus clementina
Ciclev10022068m.g
N
0.825
Ciclev10026374m.g
Citrus clementina
Ciclev10026374m.g
N
0.725
Ciclev10029274m.g
Citrus clementina
Ciclev10029274m.g
N
0.725
Cla014228
Citrullus lanatus
Cla014228
N
0.725
Cla019264
Citrullus lanatus
Cla019264
N
0.825
Cla020705
Citrullus lanatus
Cla020705
N
0.850
Cla020920
Citrullus lanatus
Cla020920
N
0.700
Cucsa.103050
Cucumis sativus
Cucsa.103050
N
0.725
Cucsa.199060
Cucumis sativus
Cucsa.199060
N
0.825
Cucsa.283560
Cucumis sativus
Cucsa.283560
N
0.850
estExt_gwp_gw1.C_2030014
Physcomitrella patens
estExt_gwp_gw1.C_2030014
N
0.725
Eucgr.B03016
Eucalyptus grandis
Eucgr.B03016
N
0.850
Eucgr.F02492
Eucalyptus grandis
Eucgr.F02492
N
0.900
Eucgr.G02321
Eucalyptus grandis
Eucgr.G02321
N
0.875
Eucgr.H02293
Eucalyptus grandis
Eucgr.H02293
N
0.750
Eucgr.K02222
Eucalyptus grandis
Eucgr.K02222
N
0.800
evm.TU.supercontig_1.42
Carica papaya
evm.TU.supercontig_1.42
N
0.850
evm.TU.supercontig_21.100
Carica papaya
evm.TU.supercontig_21.100
N
0.700
evm.TU.supercontig_282.15
Carica papaya
evm.TU.supercontig_282.15
N
0.875
evm.TU.supercontig_3.514
Carica papaya
evm.TU.supercontig_3.514
N
0.825
evm.TU.supercontig_6.40
Carica papaya
evm.TU.supercontig_6.40
N
0.750
e_gw1.19.226.1
Physcomitrella patens
e_gw1.19.226.1
N
0.750
gene25541-v1.0-hybrid
Fragaria vesca
gene25541-v1.0-hybrid
N
0.725
GLYMA07G10180
Glycine max
GLYMA07G10180
N
0.700
GLYMA08G31143
Glycine max
GLYMA08G31143
N
0.850
GLYMA08G48040
Glycine max
GLYMA08G48040
N
0.850
GLYMA10G40421
Glycine max
GLYMA10G40421
N
0.750
GLYMA13G07590
Glycine max
GLYMA13G07590
N
0.875
GLYMA17G35440
Glycine max
GLYMA17G35440
N
0.700
GLYMA18G53440
Glycine max
GLYMA18G53440
N
0.850
GLYMA19G06280
Glycine max
GLYMA19G06280
N
0.875
GLYMA20G26910
Glycine max
GLYMA20G26910
N
0.775
Gorai.002G217800
Gossypium raimondii
Gorai.002G217800
N
0.850
Gorai.005G232500
Gossypium raimondii
Gorai.005G232500
N
0.700
Gorai.006G061200
Gossypium raimondii
Gorai.006G061200
N
0.825
Gorai.007G222000
Gossypium raimondii
Gorai.007G222000
N
0.750
GRMZM2G017319
Zea mays
GRMZM2G017319
N
0.725
GRMZM2G044902
Zea mays
GRMZM2G044902
N
0.725
GRMZM2G060544
Zea mays
GRMZM2G060544
N
0.925
GRMZM2G073044
Zea mays
GRMZM2G073044
N
0.925
GRMZM2G132693
Zea mays
GRMZM2G132693
N
0.900
GSMUA_Achr1G20970_001
Musa acuminata
GSMUA_Achr1G20970_001
N
0.850
GSMUA_Achr2G13440_001
Musa acuminata
GSMUA_Achr2G13440_001
N
0.725
GSMUA_Achr2G14600_001
Musa acuminata
GSMUA_Achr2G14600_001
N
0.925
GSMUA_Achr3G29520_001
Musa acuminata
GSMUA_Achr3G29520_001
N
0.850
GSMUA_Achr4G14150_001
Musa acuminata
GSMUA_Achr4G14150_001
N
0.725
GSMUA_Achr9G00580_001
Musa acuminata
GSMUA_Achr9G00580_001
N
0.925
GSMUA_AchrUn_randomG00460_001
Musa acuminata
GSMUA_AchrUn_randomG00460_001
N
0.900
gw1.167.132.1
Physcomitrella patens
gw1.167.132.1
N
0.750
LBD37
Arabidopsis lyrata
fgenesh2_kg.8__2670__AT5G67420.1
N
0.725
LBD38
Arabidopsis lyrata
scaffold_502015.1
N
0.725
LBD40
Arabidopsis lyrata
Al_scaffold_0002_1337
N
0.825
LBD41
Arabidopsis thaliana
AT3G02550
N
0.900
LBD41
Arabidopsis lyrata
fgenesh2_kg.3__191__AT3G02550.1
N
0.900
LBD42
Arabidopsis thaliana
AT1G68510
N
0.875
LBD42
Arabidopsis lyrata
fgenesh2_kg.2__1100__AT1G68510.1
N
0.875
LPERR01G15290
Leersia perrieri
LPERR01G15290
N
0.900
Lus10007758.g
Linum usitatissimum
Lus10007758.g
N
0.700
Lus10028470.g
Linum usitatissimum
Lus10028470.g
N
0.875
MDP0000139025
Malus domestica
MDP0000139025
N
0.750
MDP0000233303
Malus domestica
MDP0000233303
N
0.800
MDP0000247079
Malus domestica
MDP0000247079
N
0.775
MDP0000261146
Malus domestica
MDP0000261146
N
0.775
MDP0000794101
Malus domestica
MDP0000794101
N
0.775
mgf007319m
Mimulus guttatus
mgf007319m
N
0.725
mgf011656m
Mimulus guttatus
mgf011656m
N
0.850
mgf017960m
Mimulus guttatus
mgf017960m
N
0.850
MLOC_11838
Hordeum vulgare
MLOC_11838
N
0.750
MLOC_58304
Hordeum vulgare
MLOC_58304
N
0.900
MTR_1g106420
Medicago truncatula
MTR_1g106420
N
0.775
MTR_4g095600
Medicago truncatula
MTR_4g095600
N
0.750
MTR_5g015880
Medicago truncatula
MTR_5g015880
N
0.725
MTR_6g018270
Medicago truncatula
MTR_6g018270
N
0.850
MTR_6g054150
Medicago truncatula
MTR_6g054150
N
0.725
MTR_6g453130
Medicago truncatula
MTR_6g453130
N
0.800
MTR_7g007010
Medicago truncatula
MTR_7g007010
N
0.850
OB01G27020
Oryza brachyantha
OB01G27020
N
0.900
OB03G33950
Oryza brachyantha
OB03G33950
N
0.725
OBART01G17510
Oryza barthii
OBART01G17510
N
0.900
OBART03G22820
Oryza barthii
OBART03G22820
N
0.775
OBART03G25820
Oryza barthii
OBART03G25820
N
0.725
OBART07G20600
Oryza barthii
OBART07G20600
N
0.725
OGLUM01G20320
Oryza glumaepatula
OGLUM01G20320
N
0.900
OGLUM03G26640
Oryza glumaepatula
OGLUM03G26640
N
0.725
OGLUM07G20380
Oryza glumaepatula
OGLUM07G20380
N
0.725
OLONG_015384
Oryza longistaminata
OLONG_015384
N
0.775
OMERI01G16320
Oryza meridionalis
OMERI01G16320
N
0.900
OMERI03G20600
Oryza meridionalis
OMERI03G20600
N
0.775
OMERI07G17270
Oryza meridionalis
OMERI07G17270
N
0.725
ONIVA01G19320
Oryza nivara
ONIVA01G19320
N
0.900
ONIVA03G24370
Oryza nivara
ONIVA03G24370
N
0.775
ONIVA03G26970
Oryza nivara
ONIVA03G26970
N
0.725
ONIVA07G19050
Oryza nivara
ONIVA07G19050
N
0.725
OPUNC01G18000
Oryza punctata
OPUNC01G18000
N
0.900
OPUNC03G21330
Oryza punctata
OPUNC03G21330
N
0.775
OPUNC03G23160
Oryza punctata
OPUNC03G23160
N
0.725
orange1.1g022591m.g
Citrus sinensis
orange1.1g022591m.g
N
0.850
orange1.1g026365m.g
Citrus sinensis
orange1.1g026365m.g
N
0.725
orange1.1g038007m.g
Citrus sinensis
orange1.1g038007m.g
N
0.825
orange1.1g045357m.g
Citrus sinensis
orange1.1g045357m.g
N
0.850
ORGLA03G0213800
Oryza glaberrima
ORGLA03G0213800
N
0.775
ORGLA03G0239300
Oryza glaberrima
ORGLA03G0239300
N
0.725
ORGLA07G0157700
Oryza glaberrima
ORGLA07G0157700
N
0.725
ORUFI01G19440
Oryza rufipogon
ORUFI01G19440
N
0.900
ORUFI03G23490
Oryza rufipogon
ORUFI03G23490
N
0.775
ORUFI03G26700
Oryza rufipogon
ORUFI03G26700
N
0.725
ORUFI07G21460
Oryza rufipogon
ORUFI07G21460
N
0.725
OS01G0511000
Oryza sativa
OS01G0511000
N
0.900
OS03G0445700
Oryza sativa
OS03G0445700
N
0.775
OS03G0609500
Oryza sativa
OS03G0609500
N
0.725
OS07G0589000
Oryza sativa
OS07G0589000
N
0.725
Pavir.Ea00650
Panicum virgatum
Pavir.Ea00650
N
0.900
Pavir.Ia01299
Panicum virgatum
Pavir.Ia01299
N
0.725
Pavir.Ia03080
Panicum virgatum
Pavir.Ia03080
N
0.725
Pavir.J00526
Panicum virgatum
Pavir.J00526
N
0.925
Pavir.J16587
Panicum virgatum
Pavir.J16587
N
0.725
PGSC0003DMG400005719
Solanum tuberosum
PGSC0003DMG400005719
N
0.800
PGSC0003DMG400012653
Solanum tuberosum
PGSC0003DMG400012653
N
0.850
PGSC0003DMG400014547
Solanum tuberosum
PGSC0003DMG400014547
N
0.825
PGSC0003DMG400025752
Solanum tuberosum
PGSC0003DMG400025752
N
0.725
PK03075.1
Cannabis sativa
PK03075.1
N
0.725
PK03169.1
Cannabis sativa
PK03169.1
N
0.825
PK04548.1
Cannabis sativa
PK04548.1
N
0.750
PK04625.1
Cannabis sativa
PK04625.1
N
0.791
Pm002404
Prunus mume
Pm002404
N
0.750
Pm005389
Prunus mume
Pm005389
N
0.725
Pm015540
Prunus mume
Pm015540
N
0.825
Pm021281
Prunus mume
Pm021281
N
0.775
Pm029059
Prunus mume
Pm029059
N
0.800
POPTR_0002s12020
Populus trichocarpa
POPTR_0002s12020
N
0.725
POPTR_0004s09920
Populus trichocarpa
POPTR_0004s09920
N
0.850
POPTR_0005s15670
Populus trichocarpa
POPTR_0005s15670
N
0.825
POPTR_0005s18900
Populus trichocarpa
POPTR_0005s18900
N
0.750
POPTR_0007s10010
Populus trichocarpa
POPTR_0007s10010
N
0.750
POPTR_0008s11950
Populus trichocarpa
POPTR_0008s11950
N
0.900
POPTR_0009s09270
Populus trichocarpa
POPTR_0009s09270
N
0.750
POPTR_0012s05340
Populus trichocarpa
POPTR_0012s05340
N
0.800
POPTR_0014s01770
Populus trichocarpa
POPTR_0014s01770
N
0.725
PRUPE_ppa011233mg
Prunus persica
PRUPE_ppa011233mg
N
0.800
PRUPE_ppa014964mg
Prunus persica
PRUPE_ppa014964mg
N
0.725
SapurV1A.0078s0410
Salix purpurea
SapurV1A.0078s0410
N
0.850
SapurV1A.0079s0150
Salix purpurea
SapurV1A.0079s0150
N
0.850
SapurV1A.0116s0210
Salix purpurea
SapurV1A.0116s0210
N
0.750
SapurV1A.0315s0090
Salix purpurea
SapurV1A.0315s0090
N
0.825
SapurV1A.0845s0090
Salix purpurea
SapurV1A.0845s0090
N
0.700
SapurV1A.0851s0010
Salix purpurea
SapurV1A.0851s0010
N
0.875
SapurV1A.2860s0030
Salix purpurea
SapurV1A.2860s0030
N
0.700
Sb01g014800
Sorghum bicolor
Sb01g014800
N
0.725
Sb01g032580
Sorghum bicolor
Sb01g032580
N
0.925
SELMODRAFT_37532
Selaginella moellendorffii
SELMODRAFT_37532
N
0.775
SELMODRAFT_37566
Selaginella moellendorffii
SELMODRAFT_37566
N
0.750
SELMODRAFT_37570
Selaginella moellendorffii
SELMODRAFT_37570
N
0.750
Si002412m.g
Setaria italica
Si002412m.g
N
0.875
Si022660m.g
Setaria italica
Si022660m.g
N
0.925
Si037275m.g
Setaria italica
Si037275m.g
N
0.725
Si037346m.g
Setaria italica
Si037346m.g
N
0.750
Solyc02g085910.2
Solanum lycopersicum
Solyc02g085910.2
N
0.850
Solyc03g119530.2
Solanum lycopersicum
Solyc03g119530.2
N
0.800
TCM_007211
Theobroma cacao
TCM_007211
N
0.725
TCM_009888
Theobroma cacao
TCM_009888
N
0.850
TCM_012338
Theobroma cacao
TCM_012338
N
0.800
TCM_019459
Theobroma cacao
TCM_019459
N
0.850
TCM_034722
Theobroma cacao
TCM_034722
N
0.700
Thhalv10004811m.g
Eutrema salsugineum
Thhalv10004811m.g
N
0.725
Thhalv10026086m.g
Eutrema salsugineum
Thhalv10026086m.g
N
0.700
TRAES3BF008500030CFD_g
Triticum aestivum
TRAES3BF008500030CFD_g
N
0.900
TRAES3BF008600030CFD_g
Triticum aestivum
TRAES3BF008600030CFD_g
N
0.900
Traes_2AL_450404EA6
Triticum aestivum
Traes_2AL_450404EA6
N
0.900
Traes_2AS_942884399
Triticum aestivum
Traes_2AS_942884399
N
0.750
Traes_2BL_3A840DB921
Triticum aestivum
Traes_2BL_3A840DB921
N
0.900
Traes_2BS_5DF7F4FEE
Triticum aestivum
Traes_2BS_5DF7F4FEE
N
0.725
Traes_2DL_9D8B5B436
Triticum aestivum
Traes_2DL_9D8B5B436
N
0.900
Traes_4AL_7241716B6
Triticum aestivum
Traes_4AL_7241716B6
N
0.725
Traes_4DL_E0847FBC5
Triticum aestivum
Traes_4DL_E0847FBC5
N
1.000
Traes_5BL_3EEBE3D51
Triticum aestivum
Traes_5BL_3EEBE3D51
N
0.900
Traes_5BS_3EEBE3D51
Triticum aestivum
Traes_5BS_3EEBE3D51
N
0.900
TRIUR3_28321
Triticum urartu
TRIUR3_28321
N
0.725
VIT_01s0011g03530
Vitis vinifera
VIT_01s0011g03530
N
0.825
VIT_01s0011g03540
Vitis vinifera
VIT_01s0011g03540
N
0.875
VIT_07s0129g00330
Vitis vinifera
VIT_07s0129g00330
N
0.700