CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT4G37435
(
Arabidopsis thaliana
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
AT4G37435
T252897_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G37435.1
MADS box
10
57
RINDRQQRNIAFAKRKNGLLKKAYELFVLCNVPVALILFSPSGKLFVF
Links
Other
MADS box
family TFs
Other
Arabidopsis thaliana
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29661.m000926
Ricinus communis
29661.m000926
I
29706.m001328
Ricinus communis
29706.m001328
I
29812.m000204
Ricinus communis
29812.m000204
I
AMTR_s00036p00166880
Amborella trichopoda
AMTR_s00036p00166880
I
Aquca_001_00028
Aquilegia coerulea
Aquca_001_00028
I
Aquca_004_00181
Aquilegia coerulea
Aquca_004_00181
I
AT1G17520
Arabidopsis thaliana
AT1G17520
I
AT1G72740
Arabidopsis thaliana
AT1G72740
D
BGIOSGA003871
Oryza indica
BGIOSGA003871
I
BGIOSGA004300
Oryza indica
BGIOSGA004300
I
Bo1g081300
Brassica oleracea
Bo1g081300
I
Bo3g096520
Brassica oleracea
Bo3g096520
I
Bo3g184590
Brassica oleracea
Bo3g184590
I
Bo5g023860
Brassica oleracea
Bo5g023860
I
Bo6g018740
Brassica oleracea
Bo6g018740
I
Bo6g116150
Brassica oleracea
Bo6g116150
I
Bo8g067280
Brassica oleracea
Bo8g067280
I
Bo8g104830
Brassica oleracea
Bo8g104830
I
Bo9g019040
Brassica oleracea
Bo9g019040
I
Bostr.0568s0184
Boechera stricta
Bostr.0568s0184
I
Bostr.10273s0077
Boechera stricta
Bostr.10273s0077
I
Bostr.26675s0174
Boechera stricta
Bostr.26675s0174
I
Bostr.6864s0256
Boechera stricta
Bostr.6864s0256
I
Bostr.7128s0363
Boechera stricta
Bostr.7128s0363
I
Bra016037
Brassica rapa
Bra016037
I
Bra016598
Brassica rapa
Bra016598
I
Bra018818
Brassica rapa
Bra018818
I
Bra024438
Brassica rapa
Bra024438
I
Bra025967
Brassica rapa
Bra025967
I
Bra029978
Brassica rapa
Bra029978
I
Bra030894
Brassica rapa
Bra030894
I
Bra030992
Brassica rapa
Bra030992
I
Bra037837
Brassica rapa
Bra037837
I
Bra037839
Brassica rapa
Bra037839
I
BRADI2G47820
Brachypodium distachyon
BRADI2G47820
I
BRADI4G01770
Brachypodium distachyon
BRADI4G01770
I
Cagra.0342s0046
Capsella grandiflora
Cagra.0342s0046
I
Cagra.0824s0121
Capsella grandiflora
Cagra.0824s0121
I
Cagra.1013s0027
Capsella grandiflora
Cagra.1013s0027
I
Cagra.2826s0004
Capsella grandiflora
Cagra.2826s0004
I
Cagra.4491s0006
Capsella grandiflora
Cagra.4491s0006
I
Carubv10009836m.g
Capsella rubella
Carubv10009836m.g
I
Carubv10009890m.g
Capsella rubella
Carubv10009890m.g
I
Carubv10017722m.g
Capsella rubella
Carubv10017722m.g
I
Carubv10020636m.g
Capsella rubella
Carubv10020636m.g
I
Carubv10026874m.g
Capsella rubella
Carubv10026874m.g
I
cassava19326.valid.m1
Manihot esculenta
cassava19326.valid.m1
I
cassava34930.m1
Manihot esculenta
cassava34930.m1
I
cassava37744.valid.m1
Manihot esculenta
cassava37744.valid.m1
I
cassava43824.valid.m1
Manihot esculenta
cassava43824.valid.m1
I
cassava7508.valid.m1
Manihot esculenta
cassava7508.valid.m1
I
Ca_02232
Cicer arietinum
Ca_02232
I
Ca_02722
Cicer arietinum
Ca_02722
I
Ca_09355
Cicer arietinum
Ca_09355
I
Ca_10058
Cicer arietinum
Ca_10058
I
chr2.LjT13P17.300.nd
Lotus japonicus
chr2.LjT13P17.300.nd
I
chr3.LjT02L14.30.nd
Lotus japonicus
chr3.LjT02L14.30.nd
I
Ciclev10009173m.g
Citrus clementina
Ciclev10009173m.g
I
Ciclev10026089m.g
Citrus clementina
Ciclev10026089m.g
I
Ciclev10026245m.g
Citrus clementina
Ciclev10026245m.g
I
Ciclev10028926m.g
Citrus clementina
Ciclev10028926m.g
I
Cla006547
Citrullus lanatus
Cla006547
I
Cla012798
Citrullus lanatus
Cla012798
I
Cla014248
Citrullus lanatus
Cla014248
I
Cucsa.103240
Cucumis sativus
Cucsa.103240
I
Cucsa.298390
Cucumis sativus
Cucsa.298390
I
Cucsa.341020
Cucumis sativus
Cucsa.341020
I
Eucgr.C00865
Eucalyptus grandis
Eucgr.C00865
I
Eucgr.H02312
Eucalyptus grandis
Eucgr.H02312
I
Eucgr.I01053
Eucalyptus grandis
Eucgr.I01053
I
Eucgr.J02841
Eucalyptus grandis
Eucgr.J02841
I
evm.TU.supercontig_106.31
Carica papaya
evm.TU.supercontig_106.31
I
fgenesh2_kg.2__1540__AT1G72740.1
Arabidopsis lyrata
fgenesh2_kg.2__1540__AT1G72740.1
I
gene07496-v1.0-hybrid
Fragaria vesca
gene07496-v1.0-hybrid
I
gene12682-v1.0-hybrid
Fragaria vesca
gene12682-v1.0-hybrid
I
gene25445-v1.0-hybrid
Fragaria vesca
gene25445-v1.0-hybrid
I
GLYMA01G40220
Glycine max
GLYMA01G40220
I
GLYMA05G22500
Glycine max
GLYMA05G22500
I
GLYMA07G00930
Glycine max
GLYMA07G00930
I
GLYMA08G20270
Glycine max
GLYMA08G20270
I
GLYMA09G03390
Glycine max
GLYMA09G03390
I
GLYMA11G05070
Glycine max
GLYMA11G05070
I
GLYMA15G14320
Glycine max
GLYMA15G14320
I
GLYMA17G17370
Glycine max
GLYMA17G17370
I
Gorai.001G013000
Gossypium raimondii
Gorai.001G013000
I
Gorai.003G030800
Gossypium raimondii
Gorai.003G030800
I
Gorai.005G230800
Gossypium raimondii
Gorai.005G230800
I
Gorai.007G224200
Gossypium raimondii
Gorai.007G224200
I
Gorai.009G143000
Gossypium raimondii
Gorai.009G143000
I
GRMZM2G023667
Zea mays
GRMZM2G023667
I
GRMZM2G108424
Zea mays
GRMZM2G108424
I
GSMUA_Achr2G13040_001
Musa acuminata
GSMUA_Achr2G13040_001
I
GSMUA_Achr4G08670_001
Musa acuminata
GSMUA_Achr4G08670_001
I
GSMUA_Achr4G09130_001
Musa acuminata
GSMUA_Achr4G09130_001
I
GSMUA_Achr6G30000_001
Musa acuminata
GSMUA_Achr6G30000_001
I
GSMUA_Achr6G31260_001
Musa acuminata
GSMUA_Achr6G31260_001
I
GSMUA_Achr8G24960_001
Musa acuminata
GSMUA_Achr8G24960_001
I
gw1.1.287.1
Physcomitrella patens
gw1.1.287.1
I
gw1.176.27.1
Physcomitrella patens
gw1.176.27.1
I
LjSGA_016825.2
Lotus japonicus
LjSGA_016825.2
I
LjSGA_029815.1
Lotus japonicus
LjSGA_029815.1
I
LjT25P15.150.nd
Lotus japonicus
LjT25P15.150.nd
I
LPERR01G18090
Leersia perrieri
LPERR01G18090
I
LPERR01G24270
Leersia perrieri
LPERR01G24270
I
Lus10011546.g
Linum usitatissimum
Lus10011546.g
I
Lus10012092.g
Linum usitatissimum
Lus10012092.g
I
Lus10014653.g
Linum usitatissimum
Lus10014653.g
I
Lus10019260.g
Linum usitatissimum
Lus10019260.g
I
Lus10025203.g
Linum usitatissimum
Lus10025203.g
I
Lus10027621.g
Linum usitatissimum
Lus10027621.g
I
Lus10030935.g
Linum usitatissimum
Lus10030935.g
I
Lus10033775.g
Linum usitatissimum
Lus10033775.g
I
Lus10040111.g
Linum usitatissimum
Lus10040111.g
I
MDP0000234807
Malus domestica
MDP0000234807
I
MDP0000239354
Malus domestica
MDP0000239354
I
MDP0000265359
Malus domestica
MDP0000265359
I
mgf007122m
Mimulus guttatus
mgf007122m
I
mgf011386m
Mimulus guttatus
mgf011386m
I
MLOC_10278
Hordeum vulgare
MLOC_10278
I
MTR_2g099610
Medicago truncatula
MTR_2g099610
I
MTR_4g097130
Medicago truncatula
MTR_4g097130
I
MTR_8g092810
Medicago truncatula
MTR_8g092810
I
MTR_8g494240
Medicago truncatula
MTR_8g494240
I
OB01G30760
Oryza brachyantha
OB01G30760
I
OB01G37330
Oryza brachyantha
OB01G37330
I
OBART01G21150
Oryza barthii
OBART01G21150
I
OBART01G28260
Oryza barthii
OBART01G28260
I
OGLUM01G32190
Oryza glumaepatula
OGLUM01G32190
I
OLONG_008666
Oryza longistaminata
OLONG_008666
I
OLONG_011068
Oryza longistaminata
OLONG_011068
I
OMERI01G19490
Oryza meridionalis
OMERI01G19490
I
OMERI01G19510
Oryza meridionalis
OMERI01G19510
I
OMERI05G07460
Oryza meridionalis
OMERI05G07460
I
ONIVA01G23780
Oryza nivara
ONIVA01G23780
I
ONIVA01G32190
Oryza nivara
ONIVA01G32190
I
OPUNC01G21220
Oryza punctata
OPUNC01G21220
I
OPUNC01G28080
Oryza punctata
OPUNC01G28080
I
orange1.1g020653m.g
Citrus sinensis
orange1.1g020653m.g
I
orange1.1g022048m.g
Citrus sinensis
orange1.1g022048m.g
I
orange1.1g023740m.g
Citrus sinensis
orange1.1g023740m.g
I
orange1.1g024128m.g
Citrus sinensis
orange1.1g024128m.g
I
ORGLA01G0168300
Oryza glaberrima
ORGLA01G0168300
I
ORGLA01G0233700
Oryza glaberrima
ORGLA01G0233700
I
ORUFI01G23880
Oryza rufipogon
ORUFI01G23880
I
ORUFI01G31370
Oryza rufipogon
ORUFI01G31370
I
OS01G0589300
Oryza sativa
OS01G0589300
I
OS01G0708000
Oryza sativa
OS01G0708000
D
OSTLU_27049
Ostreococcus lucimarinus
OSTLU_27049
I
Pavir.Ea02570
Panicum virgatum
Pavir.Ea02570
I
Pavir.Eb02802
Panicum virgatum
Pavir.Eb02802
I
PDK_20s1413011g001
Phoenix dactylifera
PDK_20s1413011g001
I
PDK_20s1467521g002
Phoenix dactylifera
PDK_20s1467521g002
I
PDK_20s1888511g002
Phoenix dactylifera
PDK_20s1888511g002
I
PGSC0003DMG401025742
Solanum tuberosum
PGSC0003DMG401025742
I
PGSC0003DMG402003328
Solanum tuberosum
PGSC0003DMG402003328
I
PK00568.1
Cannabis sativa
PK00568.1
I
PK06103.1
Cannabis sativa
PK06103.1
D
PK19870.1
Cannabis sativa
PK19870.1
I
Pm002374
Prunus mume
Pm002374
I
Pm013309
Prunus mume
Pm013309
I
Pm021139
Prunus mume
Pm021139
I
Pm027209
Prunus mume
Pm027209
I
POPTR_0001s30000
Populus trichocarpa
POPTR_0001s30000
I
POPTR_0006s14940
Populus trichocarpa
POPTR_0006s14940
I
POPTR_0007s14920
Populus trichocarpa
POPTR_0007s14920
I
POPTR_0009s09020
Populus trichocarpa
POPTR_0009s09020
I
POPTR_0014s01010
Populus trichocarpa
POPTR_0014s01010
I
POPTR_0018s07040
Populus trichocarpa
POPTR_0018s07040
I
PRUPE_ppa007796mg
Prunus persica
PRUPE_ppa007796mg
I
PRUPE_ppa009220mg
Prunus persica
PRUPE_ppa009220mg
I
PRUPE_ppa011492mg
Prunus persica
PRUPE_ppa011492mg
I
PRUPE_ppa016498mg
Prunus persica
PRUPE_ppa016498mg
I
SapurV1A.0005s0260
Salix purpurea
SapurV1A.0005s0260
I
SapurV1A.0019s0460
Salix purpurea
SapurV1A.0019s0460
I
SapurV1A.0087s0150
Salix purpurea
SapurV1A.0087s0150
I
SapurV1A.0108s0150
Salix purpurea
SapurV1A.0108s0150
I
SapurV1A.0235s0100
Salix purpurea
SapurV1A.0235s0100
I
SapurV1A.1368s0050
Salix purpurea
SapurV1A.1368s0050
I
Sb03g032530
Sorghum bicolor
Sb03g032530
I
scaffold_101953.1
Arabidopsis lyrata
scaffold_101953.1
I
SELMODRAFT_443975
Selaginella moellendorffii
SELMODRAFT_443975
I
SELMODRAFT_49296
Selaginella moellendorffii
SELMODRAFT_49296
I
SELMODRAFT_49297
Selaginella moellendorffii
SELMODRAFT_49297
I
SELMODRAFT_49312
Selaginella moellendorffii
SELMODRAFT_49312
I
Si002467m.g
Setaria italica
Si002467m.g
I
Solyc02g064630.2
Solanum lycopersicum
Solyc02g064630.2
I
Solyc07g040920.2
Solanum lycopersicum
Solyc07g040920.2
I
TCM_000807
Theobroma cacao
TCM_000807
I
TCM_007242
Theobroma cacao
TCM_007242
I
TCM_029078
Theobroma cacao
TCM_029078
I
TCM_037620
Theobroma cacao
TCM_037620
I
Thhalv10004691m.g
Eutrema salsugineum
Thhalv10004691m.g
I
Thhalv10008387m.g
Eutrema salsugineum
Thhalv10008387m.g
I
Thhalv10010562m.g
Eutrema salsugineum
Thhalv10010562m.g
I
Thhalv10011686m.g
Eutrema salsugineum
Thhalv10011686m.g
I
Thhalv10012087m.g
Eutrema salsugineum
Thhalv10012087m.g
I
Thhalv10018950m.g
Eutrema salsugineum
Thhalv10018950m.g
I
TRAES3BF075800120CFD_g
Triticum aestivum
TRAES3BF075800120CFD_g
I
Traes_3AL_12B53AB09
Triticum aestivum
Traes_3AL_12B53AB09
I
Traes_5AS_8756ECB5A
Triticum aestivum
Traes_5AS_8756ECB5A
I
Traes_5BS_EB206B8BC
Triticum aestivum
Traes_5BS_EB206B8BC
I
Traes_5DS_3EE830A43
Triticum aestivum
Traes_5DS_3EE830A43
I
TRB1
Arabidopsis thaliana
AT1G49950
D
TRB1
Arabidopsis lyrata
fgenesh2_kg.1__4077__AT1G49950.2
I
TRB1
Vitis vinifera
VIT_03s0091g01030
I
TRB2
Arabidopsis thaliana
AT5G67580
D
TRB2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8002157
I
TRB3
Arabidopsis thaliana
AT3G49850
I
TRB3
Arabidopsis lyrata
fgenesh2_kg.5__1337__AT3G49850.1
I
TRIUR3_10613
Triticum urartu
TRIUR3_10613
I
VIT_11s0016g01890
Vitis vinifera
VIT_11s0016g01890
I