Bostr.15774s0044 (Boechera stricta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Bostr.15774s0044 T257584_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G38620
M10931_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G38620_01 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.15774s0044.1.p MADS box 14 65

Links

Other MADS box family TFs
Other Boechera stricta TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29736.m002027 Ricinus communis 29736.m002027 N
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N
BGIOSGA022297 Oryza indica BGIOSGA022297 N
Bo7g080560 Brassica oleracea Bo7g080560 N
Bo8g066030 Brassica oleracea Bo8g066030 N
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N
Bra016702 Brassica rapa Bra016702 N
Bra024809 Brassica rapa Bra024809 N
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N
Carubv10010024m.g Capsella rubella Carubv10010024m.g N
Carubv10017841m.g Capsella rubella Carubv10017841m.g N
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N
Ca_24297 Cicer arietinum Ca_24297 N
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N
Cla022217 Citrullus lanatus Cla022217 N
Cucsa.005520 Cucumis sativus Cucsa.005520 N
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N
GLYMA08G40850 Glycine max GLYMA08G40850 N
GLYMA18G16200 Glycine max GLYMA18G16200 N
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N
GRMZM2G155662 Zea mays GRMZM2G155662 N
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N
LPERR06G02670 Leersia perrieri LPERR06G02670 N
Lus10036723.g Linum usitatissimum Lus10036723.g N
MDP0000268451 Malus domestica MDP0000268451 N
mgf002465m Mimulus guttatus mgf002465m N
MLOC_11586 Hordeum vulgare MLOC_11586 N
OBART06G03050 Oryza barthii OBART06G03050 N
OMERI06G03280 Oryza meridionalis OMERI06G03280 N
OMERI07G11550 Oryza meridionalis OMERI07G11550 N
ONIVA06G03980 Oryza nivara ONIVA06G03980 N
OPUNC06G02750 Oryza punctata OPUNC06G02750 N
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N
OS06G0145800 Oryza sativa OS06G0145800 N
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N
PK22670.1 Cannabis sativa PK22670.1 N
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N
Sb10g003170 Sorghum bicolor Sb10g003170 N
Si006951m.g Setaria italica Si006951m.g N
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N
TCM_011795 Theobroma cacao TCM_011795 N
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N
WHY1 Arabidopsis thaliana AT1G14410 N
WHY3 Arabidopsis thaliana AT2G02740 N