BGIOSGA014483 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA014483 T266828_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.805 0.804
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.805 0.804
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.805 0.804
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.805 0.804
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.805 0.804
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.800 0.783
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.788 0.848
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.788 0.848
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.778 0.804
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.758 0.783
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.758 0.783
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.758 0.783
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.732 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.732 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA014483-PA Myb 59 104

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

272 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bHLH104 Arabidopsis lyrata fgenesh2_kg.7__2895__AT4G14410.2 I
BHLH104 Arabidopsis thaliana AT4G14410 D
Bo4g126940 Brassica oleracea Bo4g126940 I
Bo7g040830 Brassica oleracea Bo7g040830 I
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I
Bra014923 Brassica rapa Bra014923 I
Bra041033 Brassica rapa Bra041033 I
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I
Carubv10005335m.g Capsella rubella Carubv10005335m.g I
Ciclev10005872m.g Citrus clementina Ciclev10005872m.g I
Cla021854 Citrullus lanatus Cla021854 I
Cucsa.255290 Cucumis sativus Cucsa.255290 I
Eucgr.H00174 Eucalyptus grandis Eucgr.H00174 N
evm.TU.supercontig_44.78 Carica papaya evm.TU.supercontig_44.78 I
gene11436-v1.0-hybrid Fragaria vesca gene11436-v1.0-hybrid I
Lus10021199.g Linum usitatissimum Lus10021199.g N
Lus10021876.g Linum usitatissimum Lus10021876.g N
Lus10022186.g Linum usitatissimum Lus10022186.g I
Lus10041148.g Linum usitatissimum Lus10041148.g N
orange1.1g028060m.g Citrus sinensis orange1.1g028060m.g I
POPTR_0010s08360 Populus trichocarpa POPTR_0010s08360 N
PRUPE_ppa011217mg Prunus persica PRUPE_ppa011217mg I
SapurV1A.0007s0940 Salix purpurea SapurV1A.0007s0940 N
SapurV1A.0292s0060 Salix purpurea SapurV1A.0292s0060 N
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I