CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_8g092810
(
Medicago truncatula
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MTR_8g092810
T274979_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS01G0708000
M02326_2.00
Oryza sativa
WRMCCTAVNN
NNBTAGGKYW
PBM
Weirauch et al.(2014)
pTH8716
0.712
0.739
TRB1
M01070_2.00
Arabidopsis thaliana
WRMCCTAR
YTAGGKYW
PBM
Sullivan et al.(2014)
pTH7117
0.681
0.761
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET04670
Myb
5
56
RQKWSSEEEVALKAGVVKHGVGKWSKILKDPEFNHVLYIRSNIDLKDKWRNM
Links
Other
Myb/SANT
family TFs
Other
Medicago truncatula
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29812.m000204
Ricinus communis
29812.m000204
I
0.681
29912.m005376
Ricinus communis
29912.m005376
I
0.705
AMTR_s00007p00193000
Amborella trichopoda
AMTR_s00007p00193000
I
0.669
AMTR_s00036p00166880
Amborella trichopoda
AMTR_s00036p00166880
I
0.699
Aquca_001_00028
Aquilegia coerulea
Aquca_001_00028
I
0.705
Aquca_004_00181
Aquilegia coerulea
Aquca_004_00181
I
0.715
AT1G17520
Arabidopsis thaliana
AT1G17520
I
0.680
BGIOSGA004300
Oryza indica
BGIOSGA004300
I
0.712
Bo1g081300
Brassica oleracea
Bo1g081300
I
0.700
Bo3g184590
Brassica oleracea
Bo3g184590
I
0.688
Bo5g023860
Brassica oleracea
Bo5g023860
I
0.680
Bo6g018740
Brassica oleracea
Bo6g018740
I
0.681
Bo6g116150
Brassica oleracea
Bo6g116150
I
0.678
Bo8g067280
Brassica oleracea
Bo8g067280
I
0.680
Bo8g104830
Brassica oleracea
Bo8g104830
I
0.670
Bostr.0568s0184
Boechera stricta
Bostr.0568s0184
I
0.665
Bostr.26675s0174
Boechera stricta
Bostr.26675s0174
I
0.681
Bostr.6864s0256
Boechera stricta
Bostr.6864s0256
I
0.665
Bra016037
Brassica rapa
Bra016037
I
0.678
Bra016598
Brassica rapa
Bra016598
I
0.680
Bra018818
Brassica rapa
Bra018818
I
0.681
Bra025967
Brassica rapa
Bra025967
I
0.680
Bra029978
Brassica rapa
Bra029978
I
0.700
Bra030894
Brassica rapa
Bra030894
I
0.688
Bra030992
Brassica rapa
Bra030992
I
0.678
BRADI2G47820
Brachypodium distachyon
BRADI2G47820
I
0.712
Cagra.0342s0046
Capsella grandiflora
Cagra.0342s0046
I
0.665
Cagra.0824s0121
Capsella grandiflora
Cagra.0824s0121
I
0.680
Cagra.2826s0004
Capsella grandiflora
Cagra.2826s0004
I
0.681
Cagra.4491s0006
Capsella grandiflora
Cagra.4491s0006
I
0.665
Carubv10009836m.g
Capsella rubella
Carubv10009836m.g
I
0.681
Carubv10017722m.g
Capsella rubella
Carubv10017722m.g
I
0.665
Carubv10026874m.g
Capsella rubella
Carubv10026874m.g
I
0.665
cassava19326.valid.m1
Manihot esculenta
cassava19326.valid.m1
I
0.681
cassava43824.valid.m1
Manihot esculenta
cassava43824.valid.m1
I
0.725
Ca_08043
Cicer arietinum
Ca_08043
I
0.777
chr2.LjT13P17.300.nd
Lotus japonicus
chr2.LjT13P17.300.nd
I
0.680
chr3.LjT02L14.30.nd
Lotus japonicus
chr3.LjT02L14.30.nd
I
0.688
Ciclev10009173m.g
Citrus clementina
Ciclev10009173m.g
I
0.697
Ciclev10028926m.g
Citrus clementina
Ciclev10028926m.g
I
0.681
Cla006547
Citrullus lanatus
Cla006547
I
0.715
Cla012798
Citrullus lanatus
Cla012798
I
0.683
Cucsa.298390
Cucumis sativus
Cucsa.298390
I
0.715
Cucsa.341020
Cucumis sativus
Cucsa.341020
I
0.683
Eucgr.C00865
Eucalyptus grandis
Eucgr.C00865
I
0.677
Eucgr.I01053
Eucalyptus grandis
Eucgr.I01053
I
0.681
Eucgr.J02841
Eucalyptus grandis
Eucgr.J02841
I
0.666
gene07496-v1.0-hybrid
Fragaria vesca
gene07496-v1.0-hybrid
I
0.750
gene12682-v1.0-hybrid
Fragaria vesca
gene12682-v1.0-hybrid
I
0.739
GLYMA09G03390
Glycine max
GLYMA09G03390
I
0.742
GLYMA15G14320
Glycine max
GLYMA15G14320
I
0.742
Gorai.005G230800
Gossypium raimondii
Gorai.005G230800
I
0.681
Gorai.009G143000
Gossypium raimondii
Gorai.009G143000
I
0.666
GRMZM2G023667
Zea mays
GRMZM2G023667
I
0.673
GRMZM2G095239
Zea mays
GRMZM2G095239
N
0.665
GRMZM2G108424
Zea mays
GRMZM2G108424
I
0.712
GSMUA_Achr2G13040_001
Musa acuminata
GSMUA_Achr2G13040_001
I
0.671
GSMUA_Achr4G08670_001
Musa acuminata
GSMUA_Achr4G08670_001
I
0.705
GSMUA_Achr4G09130_001
Musa acuminata
GSMUA_Achr4G09130_001
I
0.705
GSMUA_Achr7G01090_001
Musa acuminata
GSMUA_Achr7G01090_001
I
0.711
GSMUA_Achr8G24960_001
Musa acuminata
GSMUA_Achr8G24960_001
I
0.705
LjSGA_016825.2
Lotus japonicus
LjSGA_016825.2
I
0.688
LjSGA_029815.1
Lotus japonicus
LjSGA_029815.1
I
0.680
LPERR01G24270
Leersia perrieri
LPERR01G24270
I
0.712
Lus10014653.g
Linum usitatissimum
Lus10014653.g
I
0.681
Lus10027621.g
Linum usitatissimum
Lus10027621.g
I
0.675
Lus10033775.g
Linum usitatissimum
Lus10033775.g
I
0.681
MDP0000234807
Malus domestica
MDP0000234807
I
0.679
MDP0000265359
Malus domestica
MDP0000265359
I
0.685
mg015409m
Mimulus guttatus
mg015409m
N
0.697
mgf000125m
Mimulus guttatus
mgf000125m
I
0.679
mgf004823m
Mimulus guttatus
mgf004823m
I
0.759
mgf007122m
Mimulus guttatus
mgf007122m
I
0.740
mgf010975m
Mimulus guttatus
mgf010975m
I
0.679
MTR_0095s0040
Medicago truncatula
MTR_0095s0040
I
0.778
MTR_2g031870
Medicago truncatula
MTR_2g031870
I
0.742
MTR_8g494240
Medicago truncatula
MTR_8g494240
I
0.798
OB01G37330
Oryza brachyantha
OB01G37330
I
0.712
OBART01G28260
Oryza barthii
OBART01G28260
I
0.712
OGLUM01G32190
Oryza glumaepatula
OGLUM01G32190
I
0.712
OLONG_008666
Oryza longistaminata
OLONG_008666
I
0.712
OMERI05G07460
Oryza meridionalis
OMERI05G07460
I
0.712
ONIVA01G32190
Oryza nivara
ONIVA01G32190
I
0.712
OPUNC01G28080
Oryza punctata
OPUNC01G28080
I
0.712
orange1.1g022048m.g
Citrus sinensis
orange1.1g022048m.g
I
0.681
orange1.1g024128m.g
Citrus sinensis
orange1.1g024128m.g
I
0.697
ORGLA01G0233700
Oryza glaberrima
ORGLA01G0233700
I
0.712
ORUFI01G31370
Oryza rufipogon
ORUFI01G31370
I
0.712
OS01G0708000
Oryza sativa
OS01G0708000
D
0.712
Pavir.Ea02570
Panicum virgatum
Pavir.Ea02570
I
0.712
Pavir.Eb02802
Panicum virgatum
Pavir.Eb02802
I
0.712
Pavir.Ia01166
Panicum virgatum
Pavir.Ia01166
N
0.665
Pavir.Ib04118
Panicum virgatum
Pavir.Ib04118
N
0.665
PDK_20s1413011g001
Phoenix dactylifera
PDK_20s1413011g001
I
0.674
PDK_20s1467521g002
Phoenix dactylifera
PDK_20s1467521g002
I
0.673
PDK_20s1888511g002
Phoenix dactylifera
PDK_20s1888511g002
I
0.705
PGSC0003DMG400023131
Solanum tuberosum
PGSC0003DMG400023131
I
0.673
PGSC0003DMG401025742
Solanum tuberosum
PGSC0003DMG401025742
I
0.681
PGSC0003DMG402003328
Solanum tuberosum
PGSC0003DMG402003328
I
0.790
PK00568.1
Cannabis sativa
PK00568.1
I
0.731
PK19870.1
Cannabis sativa
PK19870.1
I
0.681
Pm021139
Prunus mume
Pm021139
I
0.681
Pm027209
Prunus mume
Pm027209
I
0.719
POPTR_0001s30000
Populus trichocarpa
POPTR_0001s30000
I
0.673
POPTR_0006s14940
Populus trichocarpa
POPTR_0006s14940
I
0.711
POPTR_0007s14920
Populus trichocarpa
POPTR_0007s14920
I
0.679
POPTR_0009s09020
Populus trichocarpa
POPTR_0009s09020
I
0.681
POPTR_0018s07040
Populus trichocarpa
POPTR_0018s07040
I
0.689
PRUPE_ppa007796mg
Prunus persica
PRUPE_ppa007796mg
I
0.719
PRUPE_ppa011492mg
Prunus persica
PRUPE_ppa011492mg
I
0.681
SapurV1A.0005s0260
Salix purpurea
SapurV1A.0005s0260
I
0.673
SapurV1A.0019s0460
Salix purpurea
SapurV1A.0019s0460
I
0.681
SapurV1A.0087s0150
Salix purpurea
SapurV1A.0087s0150
I
0.711
SapurV1A.0108s0150
Salix purpurea
SapurV1A.0108s0150
I
0.711
Sb01g013670
Sorghum bicolor
Sb01g013670
N
0.665
Sb03g032530
Sorghum bicolor
Sb03g032530
I
0.712
scaffold_101953.1
Arabidopsis lyrata
scaffold_101953.1
I
0.680
Si002467m.g
Setaria italica
Si002467m.g
I
0.678
Si036471m.g
Setaria italica
Si036471m.g
N
0.665
Solyc02g064630.2
Solanum lycopersicum
Solyc02g064630.2
I
0.790
Solyc07g040920.2
Solanum lycopersicum
Solyc07g040920.2
I
0.704
Solyc11g044320.1
Solanum lycopersicum
Solyc11g044320.1
I
0.673
TCM_007242
Theobroma cacao
TCM_007242
I
0.681
Thhalv10004691m.g
Eutrema salsugineum
Thhalv10004691m.g
I
0.665
Thhalv10010562m.g
Eutrema salsugineum
Thhalv10010562m.g
I
0.665
Thhalv10011686m.g
Eutrema salsugineum
Thhalv10011686m.g
I
0.681
Thhalv10012087m.g
Eutrema salsugineum
Thhalv10012087m.g
I
0.687
TRAES3BF075800120CFD_g
Triticum aestivum
TRAES3BF075800120CFD_g
I
0.712
Traes_3AL_12B53AB09
Triticum aestivum
Traes_3AL_12B53AB09
I
0.712
TRB1
Arabidopsis thaliana
AT1G49950
D
0.681
TRB1
Arabidopsis lyrata
fgenesh2_kg.1__4077__AT1G49950.2
I
0.681
TRB1
Vitis vinifera
VIT_03s0091g01030
I
0.681
TRB3
Arabidopsis lyrata
fgenesh2_kg.5__1337__AT3G49850.1
I
0.665
VIT_00s1311g00020
Vitis vinifera
VIT_00s1311g00020
I
0.686
VIT_07s0151g00480
Vitis vinifera
VIT_07s0151g00480
I
0.686
VIT_11s0016g01890
Vitis vinifera
VIT_11s0016g01890
I
0.739