Ca_10058 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_10058 T282996_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.709 0.702
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.693 0.787
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.693 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_10058 Myb 5 57

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29706.m001328 Ricinus communis 29706.m001328 I 0.672
29812.m000204 Ricinus communis 29812.m000204 I 0.696
29912.m005376 Ricinus communis 29912.m005376 I 0.680
AMTR_s00036p00166880 Amborella trichopoda AMTR_s00036p00166880 I 0.686
Aquca_060_00026 Aquilegia coerulea Aquca_060_00026 I 0.676
AT1G17520 Arabidopsis thaliana AT1G17520 I 0.683
AT1G72740 Arabidopsis thaliana AT1G72740 D 0.693
BGIOSGA035841 Oryza indica BGIOSGA035841 I 0.738
Bo6g116150 Brassica oleracea Bo6g116150 I 0.693
Bo8g067280 Brassica oleracea Bo8g067280 I 0.672
Bo8g104830 Brassica oleracea Bo8g104830 I 0.662
Bostr.10273s0077 Boechera stricta Bostr.10273s0077 I 0.693
Bostr.7128s0363 Boechera stricta Bostr.7128s0363 I 0.662
Bra016037 Brassica rapa Bra016037 I 0.693
Bra016598 Brassica rapa Bra016598 I 0.672
Bra030992 Brassica rapa Bra030992 I 0.682
BRADI2G47820 Brachypodium distachyon BRADI2G47820 I 0.749
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I 0.738
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I 0.672
Cagra.1013s0027 Capsella grandiflora Cagra.1013s0027 I 0.693
Carubv10009890m.g Capsella rubella Carubv10009890m.g I 0.711
Carubv10020636m.g Capsella rubella Carubv10020636m.g I 0.693
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I 0.696
cassava34930.m1 Manihot esculenta cassava34930.m1 I 0.672
cassava43824.valid.m1 Manihot esculenta cassava43824.valid.m1 I 0.689
Ca_02232 Cicer arietinum Ca_02232 I 0.709
Ca_02722 Cicer arietinum Ca_02722 I 0.763
Ca_09355 Cicer arietinum Ca_09355 I 0.709
chr2.LjT13P17.300.nd Lotus japonicus chr2.LjT13P17.300.nd I 0.774
chr3.LjT02L14.30.nd Lotus japonicus chr3.LjT02L14.30.nd I 0.774
Ciclev10009173m.g Citrus clementina Ciclev10009173m.g I 0.680
Ciclev10026245m.g Citrus clementina Ciclev10026245m.g I 0.711
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I 0.730
Cla006547 Citrullus lanatus Cla006547 I 0.696
Cla014248 Citrullus lanatus Cla014248 I 0.709
Cucsa.103240 Cucumis sativus Cucsa.103240 I 0.709
Cucsa.298390 Cucumis sativus Cucsa.298390 I 0.696
Eucgr.C00865 Eucalyptus grandis Eucgr.C00865 I 0.714
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I 0.699
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I 0.696
Eucgr.J02841 Eucalyptus grandis Eucgr.J02841 I 0.782
EuGene.0500010080 Micromonas sp RCC299 EuGene.0500010080 I 0.704
evm.TU.supercontig_106.31 Carica papaya evm.TU.supercontig_106.31 I 0.672
fgenesh2_kg.2__1540__AT1G72740.1 Arabidopsis lyrata fgenesh2_kg.2__1540__AT1G72740.1 I 0.693
gene05764-v1.0-hybrid Fragaria vesca gene05764-v1.0-hybrid I 0.699
gene07496-v1.0-hybrid Fragaria vesca gene07496-v1.0-hybrid I 0.750
gene12682-v1.0-hybrid Fragaria vesca gene12682-v1.0-hybrid I 0.680
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I 0.689
GLYMA01G40220 Glycine max GLYMA01G40220 I 0.709
GLYMA05G22500 Glycine max GLYMA05G22500 I 0.709
GLYMA07G00930 Glycine max GLYMA07G00930 I 0.745
GLYMA08G20270 Glycine max GLYMA08G20270 I 0.745
GLYMA11G05070 Glycine max GLYMA11G05070 I 0.709
GLYMA17G17370 Glycine max GLYMA17G17370 I 0.709
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I 0.696
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I 0.693
GRMZM2G023667 Zea mays GRMZM2G023667 I 0.770
GRMZM2G108424 Zea mays GRMZM2G108424 I 0.731
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I 0.744
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I 0.744
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I 0.689
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I 0.689
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I 0.744
LjSGA_016825.2 Lotus japonicus LjSGA_016825.2 I 0.774
LjSGA_029815.1 Lotus japonicus LjSGA_029815.1 I 0.774
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I 0.709
LPERR01G24270 Leersia perrieri LPERR01G24270 I 0.749
Lus10014653.g Linum usitatissimum Lus10014653.g I 0.696
Lus10027621.g Linum usitatissimum Lus10027621.g I 0.702
Lus10030935.g Linum usitatissimum Lus10030935.g I 0.683
Lus10033775.g Linum usitatissimum Lus10033775.g I 0.696
Lus10040111.g Linum usitatissimum Lus10040111.g I 0.683
MDP0000234807 Malus domestica MDP0000234807 I 0.727
MDP0000239354 Malus domestica MDP0000239354 I 0.709
MDP0000265359 Malus domestica MDP0000265359 I 0.680
mgf007122m Mimulus guttatus mgf007122m I 0.662
MLOC_10278 Hordeum vulgare MLOC_10278 I 0.738
MTR_1g041765 Medicago truncatula MTR_1g041765 I 0.689
MTR_2g099610 Medicago truncatula MTR_2g099610 I 0.832
MTR_4g097130 Medicago truncatula MTR_4g097130 I 0.709
MTR_5g015340 Medicago truncatula MTR_5g015340 I 0.709
MTR_8g018410 Medicago truncatula MTR_8g018410 I 0.699
OB12G25520 Oryza brachyantha OB12G25520 I 0.738
OBART12G18680 Oryza barthii OBART12G18680 I 0.738
OGLUM12G20330 Oryza glumaepatula OGLUM12G20330 I 0.738
OLONG_008332 Oryza longistaminata OLONG_008332 I 0.738
OMERI12G14000 Oryza meridionalis OMERI12G14000 I 0.716
ONIVA12G17630 Oryza nivara ONIVA12G17630 I 0.738
OPUNC12G16890 Oryza punctata OPUNC12G16890 I 0.738
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I 0.730
orange1.1g023740m.g Citrus sinensis orange1.1g023740m.g I 0.711
orange1.1g024128m.g Citrus sinensis orange1.1g024128m.g I 0.680
ORGLA12G0159400 Oryza glaberrima ORGLA12G0159400 I 0.738
ORUFI12G20880 Oryza rufipogon ORUFI12G20880 I 0.738
OS12G0613300 Oryza sativa OS12G0613300 I 0.738
Pavir.Ea02570 Panicum virgatum Pavir.Ea02570 I 0.749
Pavir.Eb02802 Panicum virgatum Pavir.Eb02802 I 0.731
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.696
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I 0.689
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I 0.744
PK00568.1 Cannabis sativa PK00568.1 I 0.669
PK06103.1 Cannabis sativa PK06103.1 D 0.709
PK19870.1 Cannabis sativa PK19870.1 I 0.730
Pm002374 Prunus mume Pm002374 I 0.709
Pm021139 Prunus mume Pm021139 I 0.707
Pm027209 Prunus mume Pm027209 I 0.680
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I 0.689
POPTR_0006s14940 Populus trichocarpa POPTR_0006s14940 I 0.680
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I 0.696
POPTR_0018s07040 Populus trichocarpa POPTR_0018s07040 I 0.702
PRUPE_ppa007796mg Prunus persica PRUPE_ppa007796mg I 0.680
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I 0.709
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I 0.707
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I 0.689
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I 0.696
SapurV1A.0087s0150 Salix purpurea SapurV1A.0087s0150 I 0.680
SapurV1A.0108s0150 Salix purpurea SapurV1A.0108s0150 I 0.680
Sb03g032530 Sorghum bicolor Sb03g032530 I 0.731
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I 0.683
SELMODRAFT_413266 Selaginella moellendorffii SELMODRAFT_413266 I 0.690
SELMODRAFT_426759 Selaginella moellendorffii SELMODRAFT_426759 I 0.690
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I 0.680
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I 0.680
Si002467m.g Setaria italica Si002467m.g I 0.783
Solyc07g040920.2 Solanum lycopersicum Solyc07g040920.2 I 0.782
TCM_007242 Theobroma cacao TCM_007242 I 0.696
TCM_029078 Theobroma cacao TCM_029078 I 0.672
Thhalv10008387m.g Eutrema salsugineum Thhalv10008387m.g I 0.672
Thhalv10011866m.g Eutrema salsugineum Thhalv10011866m.g I 0.727
Thhalv10012087m.g Eutrema salsugineum Thhalv10012087m.g I 0.737
Thhalv10018950m.g Eutrema salsugineum Thhalv10018950m.g I 0.782
TRAES3BF075800120CFD_g Triticum aestivum TRAES3BF075800120CFD_g I 0.749
Traes_3AL_12B53AB09 Triticum aestivum Traes_3AL_12B53AB09 I 0.749
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I 0.738
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I 0.738
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I 0.738
TRB1 Vitis vinifera VIT_03s0091g01030 I 0.696
TRIUR3_10613 Triticum urartu TRIUR3_10613 I 0.738
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.716
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.716
VIT_11s0016g01890 Vitis vinifera VIT_11s0016g01890 I 0.669