30054.m000786 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 30054.m000786 T283855_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.880 0.957
GPRI1
M00874_2.00 		Arabidopsis thaliana
NNDATHN
NDATHNN		 PBM
Franco-Zorrilla et al.(2014)
GLK1 		0.670 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30054.m000786 Myb 236 286

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30078.m002307 Ricinus communis 30078.m002307 N
AMTR_s00009p00072720 Amborella trichopoda AMTR_s00009p00072720 N
Aquca_030_00101 Aquilegia coerulea Aquca_030_00101 N
Aquca_053_00136 Aquilegia coerulea Aquca_053_00136 N
Bo4g186560 Brassica oleracea Bo4g186560 N
Bostr.23794s0392 Boechera stricta Bostr.23794s0392 N
Bra017213 Brassica rapa Bra017213 N
Cagra.0558s0014 Capsella grandiflora Cagra.0558s0014 N
Carubv10022939m.g Capsella rubella Carubv10022939m.g N
cassava35219.m1 Manihot esculenta cassava35219.m1 N
Ca_12052 Cicer arietinum Ca_12052 N
Ca_17153 Cicer arietinum Ca_17153 N
chr1.CM0033.1120.nc Lotus japonicus chr1.CM0033.1120.nc N
Ciclev10011376m.g Citrus clementina Ciclev10011376m.g N
Cla018594 Citrullus lanatus Cla018594 N
Cucsa.124610 Cucumis sativus Cucsa.124610 N
Eucgr.K01255 Eucalyptus grandis Eucgr.K01255 N
evm.TU.supercontig_56.16 Carica papaya evm.TU.supercontig_56.16 N
gene09615-v1.0-hybrid Fragaria vesca gene09615-v1.0-hybrid N
GLYMA03G33970 Glycine max GLYMA03G33970 N
GLYMA05G22730 Glycine max GLYMA05G22730 N
GLYMA10G06500 Glycine max GLYMA10G06500 N
GLYMA13G20700 Glycine max GLYMA13G20700 N
GLYMA19G36710 Glycine max GLYMA19G36710 N
Gorai.006G165200 Gossypium raimondii Gorai.006G165200 N
Gorai.009G415400 Gossypium raimondii Gorai.009G415400 N
GSMUA_Achr11G17050_001 Musa acuminata GSMUA_Achr11G17050_001 N
GSMUA_Achr4G30300_001 Musa acuminata GSMUA_Achr4G30300_001 N
mgf007606m Mimulus guttatus mgf007606m N
MTR_7g101840 Medicago truncatula MTR_7g101840 N
orange1.1g008352m.g Citrus sinensis orange1.1g008352m.g N
PDK_20s1626471g002 Phoenix dactylifera PDK_20s1626471g002 N
PGSC0003DMG400021553 Solanum tuberosum PGSC0003DMG400021553 N
Pm030137 Prunus mume Pm030137 N
POPTR_0006s12760 Populus trichocarpa POPTR_0006s12760 N
PRUPE_ppa003513mg Prunus persica PRUPE_ppa003513mg N
SIGF Vitis vinifera VIT_08s0040g01560 N
SIGF Arabidopsis lyrata fgenesh2_kg.4__1742__AT2G36990.1 N
SIGF Arabidopsis thaliana AT2G36990 N
Solyc09g008040.2 Solanum lycopersicum Solyc09g008040.2 N
TCM_022198 Theobroma cacao TCM_022198 N
Thhalv10016472m.g Eutrema salsugineum Thhalv10016472m.g N