Pavir.J12412 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J12412 T289370_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J12412.1.p Myb 31 76

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27568.m000253 Ricinus communis 27568.m000253 N
29767.m000200 Ricinus communis 29767.m000200 N
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N
BGIOSGA010017 Oryza indica BGIOSGA010017 N
cassava15723.m1 Manihot esculenta cassava15723.m1 N
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N
Ca_21138 Cicer arietinum Ca_21138 N
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N
Cla018179 Citrullus lanatus Cla018179 N
Cucsa.175500 Cucumis sativus Cucsa.175500 N
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N
evm.TU.supercontig_1.422 Carica papaya evm.TU.supercontig_1.422 N
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N
GLYMA03G10320 Glycine max GLYMA03G10320 N
GLYMA07G15950 Glycine max GLYMA07G15950 N
GLYMA18G39920 Glycine max GLYMA18G39920 N
Gorai.007G376400 Gossypium raimondii Gorai.007G376400 N
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N
GRMZM2G049159 Zea mays GRMZM2G049159 N
GRMZM2G098784 Zea mays GRMZM2G098784 N
LPERR03G24920 Leersia perrieri LPERR03G24920 N
Lus10023404.g Linum usitatissimum Lus10023404.g N
Lus10024384.g Linum usitatissimum Lus10024384.g N
Lus10040284.g Linum usitatissimum Lus10040284.g N
mgf011165m Mimulus guttatus mgf011165m N
mgf014897m Mimulus guttatus mgf014897m N
MTR_7g062120 Medicago truncatula MTR_7g062120 N
OB03G37330 Oryza brachyantha OB03G37330 N
OBART03G30260 Oryza barthii OBART03G30260 N
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N
OMERI03G26460 Oryza meridionalis OMERI03G26460 N
ONIVA03G31510 Oryza nivara ONIVA03G31510 N
OPUNC03G27510 Oryza punctata OPUNC03G27510 N
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N
OS03G0690600 Oryza sativa OS03G0690600 N
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N
Pavir.J32327 Panicum virgatum Pavir.J32327 N
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N
PK20526.1 Cannabis sativa PK20526.1 N
Pm002685 Prunus mume Pm002685 N
Pm018822 Prunus mume Pm018822 N
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N
PRUPE_ppa021438mg Prunus persica PRUPE_ppa021438mg N
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N
SapurV1A.0040s0520 Salix purpurea SapurV1A.0040s0520 N
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N
Sb01g039670 Sorghum bicolor Sb01g039670 N
Si034417m.g Setaria italica Si034417m.g N
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N
Solyc10g086530.1 Solanum lycopersicum Solyc10g086530.1 N
TCM_021920 Theobroma cacao TCM_021920 N
TCM_042705 Theobroma cacao TCM_042705 N
Thhalv10016318m.g Eutrema salsugineum Thhalv10016318m.g N
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N
Traes_5AL_9AE0ED26A Triticum aestivum Traes_5AL_9AE0ED26A N
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N
VIT_13s0019g01810 Vitis vinifera VIT_13s0019g01810 N