CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-112
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003702
T306224_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y70C5C.6a
Nuclear receptor
1
66
MCKICGSSESEPHFGGTSCRACAAFFRRFYHSKKLGLKCTCKTRQSNAHPCRSCRIRKCYEAGMTP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_013_00142
Aquilegia coerulea
Aquca_013_00142
I
BGIOSGA006746
Oryza indica
BGIOSGA006746
I
BRADI3G09690
Brachypodium distachyon
BRADI3G09690
I
Gorai.007G025500
Gossypium raimondii
Gorai.007G025500
I
GRMZM2G060253
Zea mays
GRMZM2G060253
I
LPERR02G09420
Leersia perrieri
LPERR02G09420
N
MLOC_57360
Hordeum vulgare
MLOC_57360
N
OB02G19930
Oryza brachyantha
OB02G19930
N
OBART02G11160
Oryza barthii
OBART02G11160
I
OGLUM02G11100
Oryza glumaepatula
OGLUM02G11100
I
OLONG_021730
Oryza longistaminata
OLONG_021730
N
OMERI02G11890
Oryza meridionalis
OMERI02G11890
N
ONIVA02G12490
Oryza nivara
ONIVA02G12490
I
OPUNC02G09900
Oryza punctata
OPUNC02G09900
I
ORUFI02G11130
Oryza rufipogon
ORUFI02G11130
I
Pavir.Ab01026
Panicum virgatum
Pavir.Ab01026
I
Pavir.J07596
Panicum virgatum
Pavir.J07596
I
Sb04g009610
Sorghum bicolor
Sb04g009610
I
Si017040m.g
Setaria italica
Si017040m.g
I
Traes_2AL_72F4E1905
Triticum aestivum
Traes_2AL_72F4E1905
I
Traes_2BL_0F18ED637
Triticum aestivum
Traes_2BL_0F18ED637
N