fgenesh2_pg.scaffold_59000067 (Branchiostoma floridae)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 fgenesh2_pg.scaffold_59000067 T322201_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DEAF1
M11266_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_01 		0.882 0.680
DEAF1
M11267_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_02 		0.882 0.680
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_59000067 SAND 139 213

Links

Other SAND family TFs
Other Branchiostoma floridae TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30076.m004471 Ricinus communis 30076.m004471 I 0.000
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.000
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.000
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.000
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.000
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.000
Bo9g176470 Brassica oleracea Bo9g176470 N 0.000
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.000
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.000
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.000
Ca_01368 Cicer arietinum Ca_01368 I 0.000
Ca_25633 Cicer arietinum Ca_25633 I 0.000
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.000
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.000
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.000
F775_20738 Aegilops tauschii F775_20738 I 0.000
F775_21292 Aegilops tauschii F775_21292 I 0.000
F775_21293 Aegilops tauschii F775_21293 I 0.000
F775_22332 Aegilops tauschii F775_22332 I 0.000
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.000
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.000
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.000
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.000
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.000
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.000
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.000
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.000
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.000
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.000
GRMZM2G018336 Zea mays GRMZM2G018336 I 0.000
GRMZM2G065538 Zea mays GRMZM2G065538 I 0.000
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.000
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.000
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.000
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.000
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.000
mgf023686m Mimulus guttatus mgf023686m I 0.000
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.000
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.000
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.000
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.000
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.000
OB01G12610 Oryza brachyantha OB01G12610 I 0.000
OB03G11610 Oryza brachyantha OB03G11610 N 0.000
OB05G32250 Oryza brachyantha OB05G32250 I 0.000
OBART04G22880 Oryza barthii OBART04G22880 I 0.000
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.000
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.000
OLONG_010584 Oryza longistaminata OLONG_010584 I 0.000
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.000
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.000
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.000
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.000
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.000
OS04G0581400 Oryza sativa OS04G0581400 I 0.000
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.000
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.000
Pavir.Ea00485 Panicum virgatum Pavir.Ea00485 I 0.000
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.000
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.000
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.000
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.000
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.000
PK04952.1 Cannabis sativa PK04952.1 I 0.000
PK21157.1 Cannabis sativa PK21157.1 I 0.000
Pm024248 Prunus mume Pm024248 I 0.000
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.000
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.000
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.000
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.000
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.000
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.000
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.000
Si036864m.g Setaria italica Si036864m.g N 0.000
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.000
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.000
TCM_005014 Theobroma cacao TCM_005014 I 0.000
TCM_015590 Theobroma cacao TCM_015590 I 0.000
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.000
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.000
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I 0.000
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.000
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.000
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.000
Traes_3AS_2E5380A2A Triticum aestivum Traes_3AS_2E5380A2A I 0.000
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.000
Traes_4DL_59B1C9052 Triticum aestivum Traes_4DL_59B1C9052 I 0.000
Traes_4DL_872A1302F Triticum aestivum Traes_4DL_872A1302F I 0.000
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.000
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.000
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.000
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.000
TRIUR3_24850 Triticum urartu TRIUR3_24850 I 0.000
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.000
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.000
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.000