CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_3g085180
(
Medicago truncatula
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
MTR_3g085180
T322735_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES72018
SBP
165
239
CQVEGCGLDLSFAKDYHRKHRICDSHSKSPVVVVAGLERRFCQQCSRFHDLSEFDDKKRSCRRRLSDHNARRRKP
Links
Other
SBP
family TFs
Other
Medicago truncatula
TFs
116 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29929.m004641
Ricinus communis
29929.m004641
I
0.943
Aquca_018_00218
Aquilegia coerulea
Aquca_018_00218
I
0.943
BGIOSGA007643
Oryza indica
BGIOSGA007643
N
0.918
Bo7g065290
Brassica oleracea
Bo7g065290
N
0.940
Bo9g058970
Brassica oleracea
Bo9g058970
N
0.942
Bostr.3148s0148
Boechera stricta
Bostr.3148s0148
N
0.927
Bra027478
Brassica rapa
Bra027478
N
0.942
Bra033671
Brassica rapa
Bra033671
N
0.942
BRADI3G03510
Brachypodium distachyon
BRADI3G03510
N
0.904
BRADI3G05510
Brachypodium distachyon
BRADI3G05510
I
0.945
Cagra.8694s0002
Capsella grandiflora
Cagra.8694s0002
N
0.940
Carubv10026434m.g
Capsella rubella
Carubv10026434m.g
N
0.940
cassava12059.valid.m1
Manihot esculenta
cassava12059.valid.m1
N
0.964
cassava6540.valid.m1
Manihot esculenta
cassava6540.valid.m1
N
0.962
Ca_11356
Cicer arietinum
Ca_11356
I
0.963
Ciclev10031391m.g
Citrus clementina
Ciclev10031391m.g
N
0.960
Eucgr.B03500
Eucalyptus grandis
Eucgr.B03500
I
0.937
evm.TU.supercontig_43.66
Carica papaya
evm.TU.supercontig_43.66
I
0.953
F775_31908
Aegilops tauschii
F775_31908
N
0.903
GLYMA11G36980
Glycine max
GLYMA11G36980
N
0.978
GLYMA18G00903
Glycine max
GLYMA18G00903
N
0.961
Gorai.002G182700
Gossypium raimondii
Gorai.002G182700
N
0.963
Gorai.005G166500
Gossypium raimondii
Gorai.005G166500
N
0.919
GRMZM2G065451
Zea mays
GRMZM2G065451
N
0.911
GRMZM2G097275
Zea mays
GRMZM2G097275
N
0.911
GRMZM2G126827
Zea mays
GRMZM2G126827
N
0.950
GRMZM2G156621
Zea mays
GRMZM2G156621
N
0.950
GRMZM2G163813
Zea mays
GRMZM2G163813
N
0.950
GSMUA_Achr10G02970_001
Musa acuminata
GSMUA_Achr10G02970_001
N
0.958
GSMUA_Achr3G05360_001
Musa acuminata
GSMUA_Achr3G05360_001
N
0.958
GSMUA_Achr3G27750_001
Musa acuminata
GSMUA_Achr3G27750_001
N
0.898
GSMUA_Achr4G05720_001
Musa acuminata
GSMUA_Achr4G05720_001
N
0.917
GSMUA_Achr4G12470_001
Musa acuminata
GSMUA_Achr4G12470_001
I
0.915
GSMUA_Achr5G21990_001
Musa acuminata
GSMUA_Achr5G21990_001
N
0.944
GSMUA_Achr5G22630_001
Musa acuminata
GSMUA_Achr5G22630_001
N
0.956
GSMUA_Achr6G36010_001
Musa acuminata
GSMUA_Achr6G36010_001
N
0.942
GSMUA_Achr8G23820_001
Musa acuminata
GSMUA_Achr8G23820_001
N
0.941
GSMUA_Achr9G14160_001
Musa acuminata
GSMUA_Achr9G14160_001
N
0.957
GSMUA_Achr9G23140_001
Musa acuminata
GSMUA_Achr9G23140_001
I
0.913
LjSGA_017270.1
Lotus japonicus
LjSGA_017270.1
N
0.984
LjSGA_032871.1
Lotus japonicus
LjSGA_032871.1
N
0.972
LPERR02G02980
Leersia perrieri
LPERR02G02980
N
0.908
LPERR02G04880
Leersia perrieri
LPERR02G04880
N
0.918
LPERR06G22200
Leersia perrieri
LPERR06G22200
N
0.910
Lus10006411.g
Linum usitatissimum
Lus10006411.g
I
0.938
Lus10011356.g
Linum usitatissimum
Lus10011356.g
I
0.912
Lus10021614.g
Linum usitatissimum
Lus10021614.g
N
0.973
MDP0000155354
Malus domestica
MDP0000155354
N
0.957
mgf010397m
Mimulus guttatus
mgf010397m
N
0.935
mgf019346m
Mimulus guttatus
mgf019346m
I
0.935
MLOC_11199
Hordeum vulgare
MLOC_11199
N
0.900
MLOC_62426
Hordeum vulgare
MLOC_62426
N
0.947
MTR_8g080680
Medicago truncatula
MTR_8g080680
N
0.907
OB02G12930
Oryza brachyantha
OB02G12930
N
0.911
OB02G14840
Oryza brachyantha
OB02G14840
N
0.915
OB06G34330
Oryza brachyantha
OB06G34330
N
0.895
OBART02G03260
Oryza barthii
OBART02G03260
N
0.904
OBART06G26610
Oryza barthii
OBART06G26610
N
0.907
OGLUM02G05530
Oryza glumaepatula
OGLUM02G05530
N
0.918
OGLUM06G28030
Oryza glumaepatula
OGLUM06G28030
N
0.907
OLONG_012160
Oryza longistaminata
OLONG_012160
N
0.907
OLONG_025693
Oryza longistaminata
OLONG_025693
N
0.904
OMERI02G03900
Oryza meridionalis
OMERI02G03900
N
0.904
OMERI02G06420
Oryza meridionalis
OMERI02G06420
N
0.918
OMERI06G26720
Oryza meridionalis
OMERI06G26720
N
0.907
ONIVA02G03070
Oryza nivara
ONIVA02G03070
N
0.904
ONIVA02G05960
Oryza nivara
ONIVA02G05960
N
0.893
ONIVA06G29160
Oryza nivara
ONIVA06G29160
N
0.907
OPUNC02G02570
Oryza punctata
OPUNC02G02570
N
0.908
OPUNC02G04800
Oryza punctata
OPUNC02G04800
N
0.918
OPUNC06G24320
Oryza punctata
OPUNC06G24320
N
0.905
orange1.1g011640m.g
Citrus sinensis
orange1.1g011640m.g
N
0.960
ORGLA02G0030600
Oryza glaberrima
ORGLA02G0030600
N
0.904
ORGLA02G0051400
Oryza glaberrima
ORGLA02G0051400
N
0.918
ORGLA06G0222300
Oryza glaberrima
ORGLA06G0222300
N
0.907
ORUFI02G03180
Oryza rufipogon
ORUFI02G03180
N
0.904
ORUFI02G05750
Oryza rufipogon
ORUFI02G05750
N
0.918
ORUFI06G28570
Oryza rufipogon
ORUFI06G28570
N
0.907
OS02G0139400
Oryza sativa
OS02G0139400
N
0.904
Pavir.Aa03225
Panicum virgatum
Pavir.Aa03225
N
0.889
Pavir.Ab00358
Panicum virgatum
Pavir.Ab00358
N
0.889
Pavir.Ab00499
Panicum virgatum
Pavir.Ab00499
N
0.936
Pavir.J20730
Panicum virgatum
Pavir.J20730
N
0.936
PGSC0003DMG400026736
Solanum tuberosum
PGSC0003DMG400026736
I
0.934
PGSC0003DMG400034310
Solanum tuberosum
PGSC0003DMG400034310
N
0.948
PK16953.1
Cannabis sativa
PK16953.1
N
0.958
Pm007020
Prunus mume
Pm007020
N
0.958
POPTR_0001s13890
Populus trichocarpa
POPTR_0001s13890
I
0.955
POPTR_0003s17120
Populus trichocarpa
POPTR_0003s17120
I
0.955
POPTR_0018s14680
Populus trichocarpa
POPTR_0018s14680
N
0.958
PRUPE_ppa005013mg
Prunus persica
PRUPE_ppa005013mg
N
0.955
SapurV1A.0001s2320
Salix purpurea
SapurV1A.0001s2320
N
0.891
SapurV1A.0056s0240
Salix purpurea
SapurV1A.0056s0240
I
0.955
SapurV1A.0430s0160
Salix purpurea
SapurV1A.0430s0160
N
0.958
SapurV1A.1271s0060
Salix purpurea
SapurV1A.1271s0060
I
0.955
Sb04g003175
Sorghum bicolor
Sb04g003175
N
0.886
Sb04g004940
Sorghum bicolor
Sb04g004940
N
0.950
Si017520m.g
Setaria italica
Si017520m.g
N
0.892
Si017749m.g
Setaria italica
Si017749m.g
N
0.934
Solyc05g015510.2
Solanum lycopersicum
Solyc05g015510.2
N
0.969
SPL12
Oryza indica
BGIOSGA020577
N
0.907
SPL12
Oryza sativa
OS06G0703500
N
0.907
SPL2
Arabidopsis thaliana
AT5G43270
N
0.942
SPL2
Arabidopsis lyrata
scaffold_800740.1
N
0.942
SPL2
Vitis vinifera
VIT_11s0065g00170
N
0.959
SPL3
Oryza indica
BGIOSGA007499
N
0.904
SPL4
Oryza sativa
OS02G0174100
N
0.918
TCM_008772
Theobroma cacao
TCM_008772
N
0.969
Thhalv10003215m.g
Eutrema salsugineum
Thhalv10003215m.g
N
0.942
Traes_6AS_32A35158A
Triticum aestivum
Traes_6AS_32A35158A
N
0.926
Traes_6AS_99C6A3B0B
Triticum aestivum
Traes_6AS_99C6A3B0B
N
0.900
Traes_6BS_F50663DF7
Triticum aestivum
Traes_6BS_F50663DF7
N
0.900
Traes_6DS_7B1596298
Triticum aestivum
Traes_6DS_7B1596298
N
0.903
Traes_6DS_C4D93239C
Triticum aestivum
Traes_6DS_C4D93239C
N
0.926
TRIUR3_09477
Triticum urartu
TRIUR3_09477
N
0.900
VIT_01s0010g03710
Vitis vinifera
VIT_01s0010g03710
I
0.957