Pm006558 (Prunus mume)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 Pm006558 T350592_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm006558 Whirly 98 233

Links

Other Whirly family TFs
Other Prunus mume TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29846.m000184 Ricinus communis 29846.m000184 I
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I
BGIOSGA017917 Oryza indica BGIOSGA017917 I
Bo1g144510 Brassica oleracea Bo1g144510 I
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I
Bra034067 Brassica rapa Bra034067 I
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I
Carubv10000643m.g Capsella rubella Carubv10000643m.g I
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I
Cla018173 Citrullus lanatus Cla018173 I
Cucsa.175460 Cucumis sativus Cucsa.175460 I
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I
F775_05724 Aegilops tauschii F775_05724 I
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I
GRMZM2G081919 Zea mays GRMZM2G081919 I
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I
LPERR01G31650 Leersia perrieri LPERR01G31650 I
LPERR05G15070 Leersia perrieri LPERR05G15070 N
Lus10022136.g Linum usitatissimum Lus10022136.g I
Lus10024394.g Linum usitatissimum Lus10024394.g I
Lus10025351.g Linum usitatissimum Lus10025351.g I
MDP0000179225 Malus domestica MDP0000179225 I
MDP0000219581 Malus domestica MDP0000219581 I
MDP0000295807 Malus domestica MDP0000295807 I
MTR_1g026870 Medicago truncatula MTR_1g026870 I
MYB3R-2 Oryza sativa OS01G0841500 I
MYB3R5 Arabidopsis thaliana AT5G02320 D
OB01G18340 Oryza brachyantha OB01G18340 I
OB01G45570 Oryza brachyantha OB01G45570 I
OB05G26770 Oryza brachyantha OB05G26770 N
OB12G16480 Oryza brachyantha OB12G16480 I
OBART01G08110 Oryza barthii OBART01G08110 I
OBART05G19200 Oryza barthii OBART05G19200 I
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I
OGLUM05G20280 Oryza glumaepatula OGLUM05G20280 N
OLONG_011886 Oryza longistaminata OLONG_011886 I
OMERI01G08160 Oryza meridionalis OMERI01G08160 I
ONIVA01G10670 Oryza nivara ONIVA01G10670 I
ONIVA05G20060 Oryza nivara ONIVA05G20060 I
OPUNC01G07980 Oryza punctata OPUNC01G07980 I
OPUNC01G08000 Oryza punctata OPUNC01G08000 I
OPUNC05G16800 Oryza punctata OPUNC05G16800 I
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I
OS12G0238000 Oryza sativa OS12G0238000 I
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I
PK12011.1 Cannabis sativa PK12011.1 D
Pm002704 Prunus mume Pm002704 I
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I
Sb03g039470 Sorghum bicolor Sb03g039470 I
Si000842m.g Setaria italica Si000842m.g I
Si021484m.g Setaria italica Si021484m.g I
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I
Traes_1AS_61D017632 Triticum aestivum Traes_1AS_61D017632 I
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I
TRIUR3_24658 Triticum urartu TRIUR3_24658 I
TRIUR3_29290 Triticum urartu TRIUR3_29290 I
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I