MDP0000268451 (Malus domestica)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 MDP0000268451 T350640_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000268451 Whirly 100 235

Links

Other Whirly family TFs
Other Malus domestica TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29736.m002027 Ricinus communis 29736.m002027 N 0.846
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.728
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.765
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.875
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.860
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.713
Bo7g080560 Brassica oleracea Bo7g080560 N 0.853
Bo8g066030 Brassica oleracea Bo8g066030 N 0.860
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.846
Bra016702 Brassica rapa Bra016702 N 0.868
Bra024809 Brassica rapa Bra024809 N 0.868
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.713
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.846
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.882
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.875
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.846
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.875
Ca_24297 Cicer arietinum Ca_24297 N 0.743
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.882
Cla022217 Citrullus lanatus Cla022217 N 0.875
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.838
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.868
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.882
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.772
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.787
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.882
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.728
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.794
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.713
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.868
mgf002465m Mimulus guttatus mgf002465m N 0.831
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.713
OBART06G03050 Oryza barthii OBART06G03050 N 0.713
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.713
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.713
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.713
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.713
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.882
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 0.713
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.713
OS06G0145800 Oryza sativa OS06G0145800 N 0.713
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.728
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.728
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.868
PK22670.1 Cannabis sativa PK22670.1 N 0.897
Pm006558 Prunus mume Pm006558 N 0.971
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.816
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.794
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.971
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.824
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.735
Si006951m.g Setaria italica Si006951m.g N 0.728
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.860
TCM_011795 Theobroma cacao TCM_011795 N 0.875
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.853
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.713
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.890
WHY1 Arabidopsis thaliana AT1G14410 N 0.875
WHY3 Arabidopsis thaliana AT2G02740 N 0.860