MDP0000273851 (Malus domestica)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 MDP0000273851 T356551_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.854 0.782
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.854 0.782
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.854 0.782
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.853 0.782
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.853 0.782
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.853 0.782
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.853 0.782
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.851 0.764
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.851 0.764
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.814 0.636
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.814 0.636
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.814 0.636
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.814 0.636
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.809 0.691
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000273851 WRKY 238 292

Links

Other WRKY family TFs
Other Malus domestica TFs

677 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27798.m000612 Ricinus communis 27798.m000612 I
29801.m003096 Ricinus communis 29801.m003096 I
29970.m000987 Ricinus communis 29970.m000987 I
30170.m013698 Ricinus communis 30170.m013698 I
30170.m013927 Ricinus communis 30170.m013927 I
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I
AtMYB70 Arabidopsis thaliana AT2G23290 D
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I
BGIOSGA020819 Oryza indica BGIOSGA020819 I
BGIOSGA030245 Oryza indica BGIOSGA030245 I
Bo1g004900 Brassica oleracea Bo1g004900 I
Bo3g153550 Brassica oleracea Bo3g153550 I
Bo4g151410 Brassica oleracea Bo4g151410 I
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I
Bra010593 Brassica rapa Bra010593 I
Bra011749 Brassica rapa Bra011749 I
Bra032176 Brassica rapa Bra032176 I
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I
Carubv10007638m.g Capsella rubella Carubv10007638m.g I
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I
cassava16103.m1 Manihot esculenta cassava16103.m1 I
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I
cassava41257.m1 Manihot esculenta cassava41257.m1 I
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I
cassava46434.m1 Manihot esculenta cassava46434.m1 I
cassava47374.m1 Manihot esculenta cassava47374.m1 I
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I
cassava8939.m1 Manihot esculenta cassava8939.m1 I
Ca_01522 Cicer arietinum Ca_01522 I
Ca_02182 Cicer arietinum Ca_02182 I
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I
Cla014191 Citrullus lanatus Cla014191 I
Cla018417 Citrullus lanatus Cla018417 I
Cla020946 Citrullus lanatus Cla020946 I
Cla021015 Citrullus lanatus Cla021015 I
Cla022889 Citrullus lanatus Cla022889 I
CM0528.210.nd Lotus japonicus CM0528.210.nd I
Cucsa.066910 Cucumis sativus Cucsa.066910 I
Cucsa.102710 Cucumis sativus Cucsa.102710 I
Cucsa.123440 Cucumis sativus Cucsa.123440 I
Cucsa.232630 Cucumis sativus Cucsa.232630 I
Cucsa.244650 Cucumis sativus Cucsa.244650 I
Cucsa.352560 Cucumis sativus Cucsa.352560 I
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I
gene18756-v1.0-hybrid Fragaria vesca gene18756-v1.0-hybrid I
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I
GLYMA01G26650 Glycine max GLYMA01G26650 I
GLYMA01G39740 Glycine max GLYMA01G39740 I
GLYMA02G43280 Glycine max GLYMA02G43280 I
GLYMA03G15810 Glycine max GLYMA03G15810 I
GLYMA04G03910 Glycine max GLYMA04G03910 I
GLYMA05G21220 Glycine max GLYMA05G21220 I
GLYMA06G04010 Glycine max GLYMA06G04010 I
GLYMA11G05550 Glycine max GLYMA11G05550 I
GLYMA14G06320 Glycine max GLYMA14G06320 I
GLYMA14G06870 Glycine max GLYMA14G06870 I
GLYMA17G35620 Glycine max GLYMA17G35620 I
GLYMA17G36370 Glycine max GLYMA17G36370 I
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I
Gorai.009G275100 Gossypium raimondii Gorai.009G275100 I
Gorai.009G276400 Gossypium raimondii Gorai.009G276400 I
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I
GRMZM2G050550 Zea mays GRMZM2G050550 I
GRMZM2G078820 Zea mays GRMZM2G078820 I
GRMZM2G087955 Zea mays GRMZM2G087955 I
GRMZM2G145444 Zea mays GRMZM2G145444 I
GRMZM5G803308 Zea mays GRMZM5G803308 I
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I
LPERR02G05810 Leersia perrieri LPERR02G05810 I
LPERR06G18380 Leersia perrieri LPERR06G18380 I
LPERR09G00910 Leersia perrieri LPERR09G00910 I
Lus10010260.g Linum usitatissimum Lus10010260.g I
Lus10014103.g Linum usitatissimum Lus10014103.g I
Lus10021762.g Linum usitatissimum Lus10021762.g I
Lus10028250.g Linum usitatissimum Lus10028250.g I
Lus10030336.g Linum usitatissimum Lus10030336.g I
Lus10032764.g Linum usitatissimum Lus10032764.g I
Lus10040239.g Linum usitatissimum Lus10040239.g I
MDP0000187872 Malus domestica MDP0000187872 I
MDP0000196986 Malus domestica MDP0000196986 I
MDP0000203733 Malus domestica MDP0000203733 I
MDP0000232454 Malus domestica MDP0000232454 I
MDP0000275800 Malus domestica MDP0000275800 I
MDP0000284922 Malus domestica MDP0000284922 I
MDP0000319124 Malus domestica MDP0000319124 I
MDP0000463846 Malus domestica MDP0000463846 I
MDP0000477900 Malus domestica MDP0000477900 I
MDP0000478512 Malus domestica MDP0000478512 I
MDP0000480596 Malus domestica MDP0000480596 I
MDP0000641708 Malus domestica MDP0000641708 I
MDP0000784297 Malus domestica MDP0000784297 I
MDP0000823270 Malus domestica MDP0000823270 I
MDP0000894463 Malus domestica MDP0000894463 I
mgf003084m Mimulus guttatus mgf003084m I
mgf006151m Mimulus guttatus mgf006151m I
mgf015566m Mimulus guttatus mgf015566m I
mgf018580m Mimulus guttatus mgf018580m I
mgf023922m Mimulus guttatus mgf023922m I
mgf025114m Mimulus guttatus mgf025114m N
mgf025567m Mimulus guttatus mgf025567m I
MLOC_10322 Hordeum vulgare MLOC_10322 I
MLOC_63964 Hordeum vulgare MLOC_63964 I
MLOC_64817 Hordeum vulgare MLOC_64817 I
MLOC_7426 Hordeum vulgare MLOC_7426 I
MTR_3g101290 Medicago truncatula MTR_3g101290 I
MTR_4g019370 Medicago truncatula MTR_4g019370 I
MTR_4g094982 Medicago truncatula MTR_4g094982 I
MTR_5g016510 Medicago truncatula MTR_5g016510 I
MTR_5g082910 Medicago truncatula MTR_5g082910 I
MTR_6g015455 Medicago truncatula MTR_6g015455 I
MYB1 Arabidopsis thaliana AT3G09230 D
MYB73 Arabidopsis thaliana AT4G37260 D
OB09G10200 Oryza brachyantha OB09G10200 I
OBART09G00310 Oryza barthii OBART09G00310 I
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I
OGLUM06G23260 Oryza glumaepatula OGLUM06G23260 I
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I
OMERI02G07700 Oryza meridionalis OMERI02G07700 I
OMERI06G22090 Oryza meridionalis OMERI06G22090 I
OMERI08G05160 Oryza meridionalis OMERI08G05160 I
ONIVA02G08210 Oryza nivara ONIVA02G08210 I
ONIVA06G26080 Oryza nivara ONIVA06G26080 I
ONIVA09G00250 Oryza nivara ONIVA09G00250 I
OPUNC02G05820 Oryza punctata OPUNC02G05820 I
OPUNC06G19910 Oryza punctata OPUNC06G19910 I
OPUNC12G06260 Oryza punctata OPUNC12G06260 I
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I
ORGLA06G0184100 Oryza glaberrima ORGLA06G0184100 I
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I
ORUFI06G23790 Oryza rufipogon ORUFI06G23790 I
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I
OS02G0187700 Oryza sativa OS02G0187700 D
OS06G0637500 Oryza sativa OS06G0637500 I
OS09G0106700 Oryza sativa OS09G0106700 I
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I
Pavir.Da00404 Panicum virgatum Pavir.Da00404 I
Pavir.Db00693 Panicum virgatum Pavir.Db00693 I
Pavir.J23512 Panicum virgatum Pavir.J23512 I
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I
PK07741.1 Cannabis sativa PK07741.1 D
PK12959.1 Cannabis sativa PK12959.1 I
PK16550.1 Cannabis sativa PK16550.1 I
PK17282.1 Cannabis sativa PK17282.1 I
PK28565.1 Cannabis sativa PK28565.1 D
PK29071.1 Cannabis sativa PK29071.1 I
Pm002576 Prunus mume Pm002576 I
Pm005220 Prunus mume Pm005220 I
Pm005332 Prunus mume Pm005332 I
Pm018862 Prunus mume Pm018862 I
Pm021211 Prunus mume Pm021211 I
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I
PRUPE_ppa023154mg Prunus persica PRUPE_ppa023154mg I
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I
Sb02g013010 Sorghum bicolor Sb02g013010 I
Sb04g005940 Sorghum bicolor Sb04g005940 I
Sb10g024950 Sorghum bicolor Sb10g024950 I
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I
Si006938m.g Setaria italica Si006938m.g I
Si017917m.g Setaria italica Si017917m.g I
Si032789m.g Setaria italica Si032789m.g I
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I
TCM_000696 Theobroma cacao TCM_000696 I
TCM_007138 Theobroma cacao TCM_007138 I
TCM_021796 Theobroma cacao TCM_021796 I
TCM_042629 Theobroma cacao TCM_042629 I
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I
Traes_7DL_1FA87027B Triticum aestivum Traes_7DL_1FA87027B I
TRIUR3_25447 Triticum urartu TRIUR3_25447 I
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I
VIT_08s0007g01540 Vitis vinifera VIT_08s0007g01540 I
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I