CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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A1O7_00849
(
Cladophialophora yegresii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
A1O7_00849
T358708_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01368
M01340_2.00
Aspergillus nidulans
CGGVNMNWWH
DWWNKNBCCG
PBM
Lambert et al.(2019)
pEX0202
0.601
0.789
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXJ64513
Zinc cluster
54
92
AACDECRKRKLKCSGEPTGCGRCVKQKLICHYSAQKQMG
Links
Other
Zinc cluster
family TFs
Other
Cladophialophora yegresii
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30073.m002204
Ricinus communis
30073.m002204
N
AMTR_s00077p00190160
Amborella trichopoda
AMTR_s00077p00190160
N
Aquca_004_00566
Aquilegia coerulea
Aquca_004_00566
N
BGIOSGA034703
Oryza indica
BGIOSGA034703
N
BGIOSGA036912
Oryza indica
BGIOSGA036912
N
Bo8g083500
Brassica oleracea
Bo8g083500
N
Bostr.0697s0034
Boechera stricta
Bostr.0697s0034
N
Cagra.0562s0013
Capsella grandiflora
Cagra.0562s0013
N
Carubv10016802m.g
Capsella rubella
Carubv10016802m.g
N
cassava25218.valid.m1
Manihot esculenta
cassava25218.valid.m1
N
cassava36326.valid.m1
Manihot esculenta
cassava36326.valid.m1
N
Ca_09530
Cicer arietinum
Ca_09530
N
chr1.CM1255.400.nc
Lotus japonicus
chr1.CM1255.400.nc
N
Ciclev10011085m.g
Citrus clementina
Ciclev10011085m.g
N
Cla012346
Citrullus lanatus
Cla012346
N
Cucsa.002880
Cucumis sativus
Cucsa.002880
N
Eucgr.K01320
Eucalyptus grandis
Eucgr.K01320
N
evm.TU.supercontig_1018.1
Carica papaya
evm.TU.supercontig_1018.1
N
gene13644-v1.0-hybrid
Fragaria vesca
gene13644-v1.0-hybrid
N
GLYMA09G40620
Glycine max
GLYMA09G40620
N
GLYMA18G45220
Glycine max
GLYMA18G45220
N
Gorai.005G001300
Gossypium raimondii
Gorai.005G001300
N
Gorai.006G236200
Gossypium raimondii
Gorai.006G236200
N
GRMZM2G015080
Zea mays
GRMZM2G015080
N
GRMZM2G131516
Zea mays
GRMZM2G131516
N
GSMUA_Achr8G09400_001
Musa acuminata
GSMUA_Achr8G09400_001
N
LPERR11G01220
Leersia perrieri
LPERR11G01220
N
LPERR12G01340
Leersia perrieri
LPERR12G01340
N
Lus10016496.g
Linum usitatissimum
Lus10016496.g
N
Lus10040734.g
Linum usitatissimum
Lus10040734.g
N
MDP0000397638
Malus domestica
MDP0000397638
N
mgf012242m
Mimulus guttatus
mgf012242m
N
MLOC_64716
Hordeum vulgare
MLOC_64716
N
MTR_7g074650
Medicago truncatula
MTR_7g074650
N
OBART12G01190
Oryza barthii
OBART12G01190
N
OGLUM11G01180
Oryza glumaepatula
OGLUM11G01180
N
OLONG_010321
Oryza longistaminata
OLONG_010321
N
orange1.1g014896m.g
Citrus sinensis
orange1.1g014896m.g
N
ORUFI11G01380
Oryza rufipogon
ORUFI11G01380
N
ORUFI12G01460
Oryza rufipogon
ORUFI12G01460
N
Pavir.J08573
Panicum virgatum
Pavir.J08573
N
PGSC0003DMG400016833
Solanum tuberosum
PGSC0003DMG400016833
N
Pm002956
Prunus mume
Pm002956
N
POPTR_0006s11500
Populus trichocarpa
POPTR_0006s11500
N
POPTR_0016s15060
Populus trichocarpa
POPTR_0016s15060
N
PRUPE_ppa001546mg
Prunus persica
PRUPE_ppa001546mg
N
SapurV1A.0208s0090
Salix purpurea
SapurV1A.0208s0090
N
SapurV1A.1165s0100
Salix purpurea
SapurV1A.1165s0100
N
Sb05g001500
Sorghum bicolor
Sb05g001500
N
SCR
Arabidopsis thaliana
AT3G54220
N
SCR
Vitis vinifera
VIT_08s0056g00050
N
SCR
Arabidopsis lyrata
fgenesh2_kg.5__1811__AT3G54220.1
N
SCR1
Oryza sativa
OS11G0124300
N
SCR2
Oryza sativa
OS12G0122000
N
Solyc10g074680.1
Solanum lycopersicum
Solyc10g074680.1
N
TCM_017746
Theobroma cacao
TCM_017746
N
Thhalv10010179m.g
Eutrema salsugineum
Thhalv10010179m.g
N
Traes_4BS_A05D3DC53
Triticum aestivum
Traes_4BS_A05D3DC53
N
Traes_4DS_2CE9E3235
Triticum aestivum
Traes_4DS_2CE9E3235
N
Traes_5BL_C02570726
Triticum aestivum
Traes_5BL_C02570726
N