CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G006745
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G006745
T002071_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q1ESI9_MAIZE
M09714_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB2A_02
0.849
1.000
Q84ND8_HORVU
M09719_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF11_01
0.724
0.900
Q84JE9_HORVU
M09718_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF13_01
0.724
0.900
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.702
0.820
Q8H769_WHEAT
M09721_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.688
0.800
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G006745_P01
AP2
83
134
CGYRGVRQRTWGKWVAEIREPNRVDRLWLGTFPTAEDAARAYDEAARAMYGD
GRMZM2G006745_P02
AP2
131
182
CGYRGVRQRTWGKWVAEIREPNRVDRLWLGTFPTAEDAARAYDEAARAMYGD
GRMZM2G006745_P03
AP2
12
63
CGYRGVRQRTWGKWVAEIREPNRVDRLWLGTFPTAEDAARAYDEAARAMYGD
GRMZM2G006745_P04
AP2
12
63
CGYRGVRQRTWGKWVAEIREPNRVDRLWLGTFPTAEDAARAYDEAARAMYGD
GRMZM2G006745_P06
AP2
12
63
CGYRGVRQRTWGKWVAEIREPNRVDRLWLGTFPTAEDAARAYDEAARAMYGD
Links
Other
AP2
family TFs
Other
Zea mays
TFs
98 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_01779
Aegilops tauschii
F775_01779
I
0.687
F775_02345
Aegilops tauschii
F775_02345
I
0.702
F775_32062
Aegilops tauschii
F775_32062
I
0.828
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.744
Aquca_013_00679
Aquilegia coerulea
Aquca_013_00679
I
0.704
Bostr.23794s0027
Boechera stricta
Bostr.23794s0027
I
0.692
BRADI3G12680
Brachypodium distachyon
BRADI3G12680
I
0.694
Cla001755
Citrullus lanatus
Cla001755
I
0.708
Cla022803
Citrullus lanatus
Cla022803
I
Ciclev10022244m.g
Citrus clementina
Ciclev10022244m.g
I
Cucsa.231820
Cucumis sativus
Cucsa.231820
I
Cucsa.119440
Cucumis sativus
Cucsa.119440
I
0.708
Eucgr.F01607
Eucalyptus grandis
Eucgr.F01607
I
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.736
MLOC_12223
Hordeum vulgare
MLOC_12223
I
0.699
MLOC_66580
Hordeum vulgare
MLOC_66580
I
0.702
LPERR08G12790
Leersia perrieri
LPERR08G12790
I
0.691
LPERR08G20650
Leersia perrieri
LPERR08G20650
I
0.686
Lus10024298.g
Linum usitatissimum
Lus10024298.g
I
Lus10010632.g
Linum usitatissimum
Lus10010632.g
I
0.677
Lus10006127.g
Linum usitatissimum
Lus10006127.g
I
chr1.CM0195.510.nd
Lotus japonicus
chr1.CM0195.510.nd
I
MDP0000147009
Malus domestica
MDP0000147009
I
0.735
MDP0000165880
Malus domestica
MDP0000165880
I
0.744
MDP0000250927
Malus domestica
MDP0000250927
I
MDP0000446783
Malus domestica
MDP0000446783
I
0.735
MTR_3g112440
Medicago truncatula
MTR_3g112440
I
mgf017629m
Mimulus guttatus
mgf017629m
I
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.695
GSMUA_AchrUn_randomG08690_001
Musa acuminata
GSMUA_AchrUn_randomG08690_001
I
GSMUA_Achr3G00320_001
Musa acuminata
GSMUA_Achr3G00320_001
I
OB08G30790
Oryza brachyantha
OB08G30790
I
0.701
ORGLA08G0193700
Oryza glaberrima
ORGLA08G0193700
I
0.701
OGLUM08G25470
Oryza glumaepatula
OGLUM08G25470
I
0.701
BGIOSGA026464
Oryza indica
BGIOSGA026464
I
0.701
BGIOSGA026461
Oryza indica
BGIOSGA026461
I
0.701
OMERI08G18820
Oryza meridionalis
OMERI08G18820
I
0.701
ONIVA09G01190
Oryza nivara
ONIVA09G01190
I
0.701
OPUNC08G21890
Oryza punctata
OPUNC08G21890
I
0.701
ORUFI08G26490
Oryza rufipogon
ORUFI08G26490
I
0.701
DREB2C
Oryza sativa
OS08G0565200
I
0.701
Pavir.J22169
Panicum virgatum
Pavir.J22169
I
0.702
Pavir.Cb01298
Panicum virgatum
Pavir.Cb01298
I
0.834
Pavir.Ca01725
Panicum virgatum
Pavir.Ca01725
I
0.834
Pm018989
Prunus mume
Pm018989
I
0.735
PRUPE_ppa022996mg
Prunus persica
PRUPE_ppa022996mg
I
0.723
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.735
SELMODRAFT_38500
Selaginella moellendorffii
SELMODRAFT_38500
N
SELMODRAFT_38498
Selaginella moellendorffii
SELMODRAFT_38498
N
SELMODRAFT_38483
Selaginella moellendorffii
SELMODRAFT_38483
I
SELMODRAFT_27203
Selaginella moellendorffii
SELMODRAFT_27203
I
Si022619m.g
Setaria italica
Si022619m.g
I
0.804
Si024059m.g
Setaria italica
Si024059m.g
I
0.702
Solyc04g050750.1
Solanum lycopersicum
Solyc04g050750.1
I
PGSC0003DMG400028700
Solanum tuberosum
PGSC0003DMG400028700
I
Sb07g023575
Sorghum bicolor
Sb07g023575
I
Sb09g016150
Sorghum bicolor
Sb09g016150
I
0.839
TCM_026121
Theobroma cacao
TCM_026121
I
0.692
Traes_2DL_B32203C91
Triticum aestivum
Traes_2DL_B32203C91
I
0.702
Traes_2BL_B397F2CE3
Triticum aestivum
Traes_2BL_B397F2CE3
I
0.704
Traes_2AL_3FB37A3E7
Triticum aestivum
Traes_2AL_3FB37A3E7
I
0.689
Traes_1BL_BDF0801D01
Triticum aestivum
Traes_1BL_BDF0801D01
I
0.828
Traes_1AL_A9FB6BF52
Triticum aestivum
Traes_1AL_A9FB6BF52
I
0.828
TRIUR3_17409
Triticum urartu
TRIUR3_17409
I
0.828
TRIUR3_03342
Triticum urartu
TRIUR3_03342
N
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.720
Q1ESI9_MAIZE
Zea mays
Q1ESI9_MAIZE
D
0.849
GRMZM2G156737
Zea mays
GRMZM2G156737
I
GRMZM2G028386
Zea mays
GRMZM2G028386
I