Pm027117 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm027117 T006648_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.794 0.900
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.794 0.900
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.792 0.920
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.792 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm027117 AP2 17 68

Links

Other AP2 family TFs
Other Prunus mume TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_23111 Aegilops tauschii F775_23111 I 0.689
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.774
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.683
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.786
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.792
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.794
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.755
ERF017 Arabidopsis thaliana AT1G19210 D 0.792
ERF018 Arabidopsis thaliana AT1G74930 D 0.794
ERF016 Arabidopsis thaliana AT5G21960 I 0.749
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.755
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.794
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.768
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.690
Bo2g023630 Brassica oleracea Bo2g023630 I 0.745
Bo3g015600 Brassica oleracea Bo3g015600 I 0.756
Bo6g086740 Brassica oleracea Bo6g086740 I 0.786
Bo6g119120 Brassica oleracea Bo6g119120 I 0.790
Bo8g068370 Brassica oleracea Bo8g068370 I 0.802
Bo8g102870 Brassica oleracea Bo8g102870 I 0.801
Bo9g149820 Brassica oleracea Bo9g149820 I 0.755
Bra002377 Brassica rapa Bra002377 I 0.755
Bra003780 Brassica rapa Bra003780 I 0.786
Bra006599 Brassica rapa Bra006599 I 0.756
Bra015882 Brassica rapa Bra015882 I 0.793
Bra016518 Brassica rapa Bra016518 I 0.802
Bra020162 Brassica rapa Bra020162 I 0.744
Bra025719 Brassica rapa Bra025719 I 0.765
Bra031069 Brassica rapa Bra031069 I 0.801
PK18548.1 Cannabis sativa PK18548.1 I 0.734
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.786
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.792
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.755
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.792
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.786
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.791
Ca_01683 Cicer arietinum Ca_01683 I 0.788
Ca_09124 Cicer arietinum Ca_09124 I 0.785
Ca_19295 Cicer arietinum Ca_19295 I 0.760
Ca_19296 Cicer arietinum Ca_19296 I 0.755
Ca_19297 Cicer arietinum Ca_19297 I 0.757
Cla007584 Citrullus lanatus Cla007584 I 0.785
Cla011318 Citrullus lanatus Cla011318 I 0.788
Cla022291 Citrullus lanatus Cla022291 I 0.748
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.784
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.794
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.784
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.748
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.788
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.762
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.812
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.749
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.788
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.800
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.749
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.775
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.798
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.786
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.786
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.779
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.775
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.753
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.776
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.777
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.761
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.786
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.797
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.733
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.789
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.809
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.763
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.743
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.699
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.802
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.806
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.806
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.802
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.753
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.775
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.734
MDP0000649022 Malus domestica MDP0000649022 I 0.803
MDP0000704216 Malus domestica MDP0000704216 I 0.795
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.795
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.786
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.819
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.698
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.771
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.763
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.763
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.727
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.758
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.758
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.772
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.754
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.754
mgf021940m Mimulus guttatus mgf021940m I 0.792
mgf024162m Mimulus guttatus mgf024162m I 0.797
mgf025452m Mimulus guttatus mgf025452m I 0.784
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.746
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.719
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.726
OBART08G16950 Oryza barthii OBART08G16950 I 0.699
OB08G24280 Oryza brachyantha OB08G24280 I 0.699
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.733
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.733
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.699
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.733
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.699
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.733
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.733
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.699
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.733
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.699
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.733
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.699
OS02G0781300 Oryza sativa OS02G0781300 I 0.733
OS08G0454000 Oryza sativa OS08G0454000 I 0.699
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.772
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.699
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.699
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.774
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.807
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.819
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.791
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.775
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.822
29739.m003647 Ricinus communis 29739.m003647 I 0.785
29739.m003716 Ricinus communis 29739.m003716 I 0.822
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.789
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.791
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.810
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.791
Si008104m.g Setaria italica Si008104m.g I 0.724
Si015027m.g Setaria italica Si015027m.g I 0.699
Si019636m.g Setaria italica Si019636m.g I 0.772
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.748
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.771
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.771
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.748
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.685
TCM_037415 Theobroma cacao TCM_037415 I 0.809
TCM_037486 Theobroma cacao TCM_037486 I 0.792
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.692
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.721
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.751
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.802
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.788
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.774
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.699