gw1.117.121.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.117.121.1 T007253_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_gwp_gw1.C_550163
M01640_2.00 		Physcomitrella patens
NCACCGACHN
NDGTCGGTGN		 PBM
Weirauch et al.(2014)
pTH8472 		0.759 0.940
gw1.8.141.1
M01642_2.00 		Physcomitrella patens
CACCGACM
KGTCGGTG		 PBM
Weirauch et al.(2014)
pTH8456 		0.728 0.900
estExt_fgenesh1_pg.C_4800009
M01639_2.00 		Physcomitrella patens
MACCGACM
KGTCGGTK		 PBM
Weirauch et al.(2014)
pTH8488 		0.717 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.117.121.1 AP2 7 58

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02918 Aegilops tauschii F775_02918 I
AMTR_s00003p00271440 Amborella trichopoda AMTR_s00003p00271440 I
Aquca_005_00496 Aquilegia coerulea Aquca_005_00496 I
Aquca_038_00198 Aquilegia coerulea Aquca_038_00198 I
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I
fgenesh1_pg.C_scaffold_8001466 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001466 I
AtMYB41 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001108 I
fgenesh1_pm.C_scaffold_8001114 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001114 I
ATMYB102 Arabidopsis lyrata fgenesh2_kg.7__2173__AT4G21440.1 I
AtMYB74 Arabidopsis thaliana AT4G05100 D
ATMYB102 Arabidopsis thaliana AT4G21440 I
AtMYB41 Arabidopsis thaliana AT4G28110 D
MYB49 Arabidopsis thaliana AT5G54230 D
Bostr.10689s0089 Boechera stricta Bostr.10689s0089 I
Bostr.26833s0846 Boechera stricta Bostr.26833s0846 I
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I
Bostr.7867s0646 Boechera stricta Bostr.7867s0646 I
BRADI1G24887 Brachypodium distachyon BRADI1G24887 I
BRADI5G16707 Brachypodium distachyon BRADI5G16707 I
Bo1g024170 Brassica oleracea Bo1g024170 I
Bo1g051220 Brassica oleracea Bo1g051220 I
Bo3g022210 Brassica oleracea Bo3g022210 I
Bo3g162580 Brassica oleracea Bo3g162580 I
Bo7g107420 Brassica oleracea Bo7g107420 I
Bo7g111870 Brassica oleracea Bo7g111870 I
Bo9g076410 Brassica oleracea Bo9g076410 I
Bra013526 Brassica rapa Bra013526 I
Bra020892 Brassica rapa Bra020892 I
Bra024224 Brassica rapa Bra024224 I
Bra026281 Brassica rapa Bra026281 I
Bra029033 Brassica rapa Bra029033 I
Bra029553 Brassica rapa Bra029553 I
Bra038774 Brassica rapa Bra038774 I
Cagra.1225s0085 Capsella grandiflora Cagra.1225s0085 I
Cagra.1629s0007 Capsella grandiflora Cagra.1629s0007 I
Cagra.1981s0006 Capsella grandiflora Cagra.1981s0006 I
Cagra.2455s0004 Capsella grandiflora Cagra.2455s0004 I
Carubv10001366m.g Capsella rubella Carubv10001366m.g I
Carubv10004873m.g Capsella rubella Carubv10004873m.g I
Carubv10007810m.g Capsella rubella Carubv10007810m.g I
Carubv10026801m.g Capsella rubella Carubv10026801m.g I
evm.TU.supercontig_12.22 Carica papaya evm.TU.supercontig_12.22 I
evm.TU.supercontig_27.135 Carica papaya evm.TU.supercontig_27.135 I
evm.TU.supercontig_34.69 Carica papaya evm.TU.supercontig_34.69 I
Ca_00232 Cicer arietinum Ca_00232 I
Ca_11228 Cicer arietinum Ca_11228 I
Ca_11494 Cicer arietinum Ca_11494 I
Ca_22021 Cicer arietinum Ca_22021 I
Cla001360 Citrullus lanatus Cla001360 I
Cla006077 Citrullus lanatus Cla006077 I
Cla007838 Citrullus lanatus Cla007838 I
Cla019747 Citrullus lanatus Cla019747 I
Ciclev10003251m.g Citrus clementina Ciclev10003251m.g I
Ciclev10009050m.g Citrus clementina Ciclev10009050m.g I
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I
orange1.1g045387m.g Citrus sinensis orange1.1g045387m.g I
Cucsa.045790 Cucumis sativus Cucsa.045790 I
Cucsa.053600 Cucumis sativus Cucsa.053600 I
Cucsa.118450 Cucumis sativus Cucsa.118450 I
Cucsa.126220 Cucumis sativus Cucsa.126220 I
Cucsa.148040 Cucumis sativus Cucsa.148040 I
Eucgr.A01772 Eucalyptus grandis Eucgr.A01772 I
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I
Eucgr.F01069 Eucalyptus grandis Eucgr.F01069 I
Thhalv10014125m.g Eutrema salsugineum Thhalv10014125m.g I
Thhalv10027463m.g Eutrema salsugineum Thhalv10027463m.g I
Thhalv10027571m.g Eutrema salsugineum Thhalv10027571m.g I
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I
gene01992-v1.0-hybrid Fragaria vesca gene01992-v1.0-hybrid I
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I
gene11462-v1.0-hybrid Fragaria vesca gene11462-v1.0-hybrid I
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I
GLYMA02G12242 Glycine max GLYMA02G12242 I
GLYMA06G45460 Glycine max GLYMA06G45460 I
GLYMA07G30860 Glycine max GLYMA07G30860 I
GLYMA08G06440 Glycine max GLYMA08G06440 I
GLYMA12G11600 Glycine max GLYMA12G11600 I
GLYMA12G32610 Glycine max GLYMA12G32610 I
GLYMA12G34650 Glycine max GLYMA12G34650 I
GLYMA13G32090 Glycine max GLYMA13G32090 I
GLYMA13G35810 Glycine max GLYMA13G35810 I
GLYMA13G37820 Glycine max GLYMA13G37820 I
GLYMA15G07230 Glycine max GLYMA15G07230 I
Gorai.002G077200 Gossypium raimondii Gorai.002G077200 I
Gorai.004G183500 Gossypium raimondii Gorai.004G183500 I
Gorai.004G183600 Gossypium raimondii Gorai.004G183600 I
Gorai.005G206300 Gossypium raimondii Gorai.005G206300 I
Gorai.008G151400 Gossypium raimondii Gorai.008G151400 I
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I
Gorai.011G023800 Gossypium raimondii Gorai.011G023800 I
Gorai.012G132200 Gossypium raimondii Gorai.012G132200 I
MLOC_62436 Hordeum vulgare MLOC_62436 I
MLOC_68698 Hordeum vulgare MLOC_68698 I
LPERR07G15930 Leersia perrieri LPERR07G15930 I
Lus10002593.g Linum usitatissimum Lus10002593.g I
Lus10006740.g Linum usitatissimum Lus10006740.g I
Lus10018418.g Linum usitatissimum Lus10018418.g I
Lus10020085.g Linum usitatissimum Lus10020085.g I
Lus10039743.g Linum usitatissimum Lus10039743.g I
chr3.CM0711.160.nd Lotus japonicus chr3.CM0711.160.nd I
LjSGA_022617.1 Lotus japonicus LjSGA_022617.1 I
MDP0000144751 Malus domestica MDP0000144751 I
MDP0000468201 Malus domestica MDP0000468201 I
MDP0000492221 Malus domestica MDP0000492221 I
MDP0000710259 Malus domestica MDP0000710259 I
cassava19500.valid.m1 Manihot esculenta cassava19500.valid.m1 I
cassava2558.valid.m1 Manihot esculenta cassava2558.valid.m1 I
cassava39892.m1 Manihot esculenta cassava39892.m1 I
cassava41325.m1 Manihot esculenta cassava41325.m1 I
MTR_2g011660 Medicago truncatula MTR_2g011660 I
MTR_2g089620 Medicago truncatula MTR_2g089620 I
MTR_4g091490 Medicago truncatula MTR_4g091490 I
MTR_5g029840 Medicago truncatula MTR_5g029840 I
MTR_7g115650 Medicago truncatula MTR_7g115650 I
mgf018114m Mimulus guttatus mgf018114m I
mgf023669m Mimulus guttatus mgf023669m I
mgf025298m Mimulus guttatus mgf025298m I
mgf026502m Mimulus guttatus mgf026502m I
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I
GSMUA_Achr2G02970_001 Musa acuminata GSMUA_Achr2G02970_001 I
GSMUA_Achr6G29310_001 Musa acuminata GSMUA_Achr6G29310_001 I
GSMUA_Achr9G12180_001 Musa acuminata GSMUA_Achr9G12180_001 I
GSMUA_Achr9G24560_001 Musa acuminata GSMUA_Achr9G24560_001 I
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I
OBART07G18450 Oryza barthii OBART07G18450 I
OB04G26860 Oryza brachyantha OB04G26860 I
OB07G24240 Oryza brachyantha OB07G24240 I
ORGLA04G0169000 Oryza glaberrima ORGLA04G0169000 I
ORGLA07G0148800 Oryza glaberrima ORGLA07G0148800 I
OGLUM07G18250 Oryza glumaepatula OGLUM07G18250 I
BGIOSGA016822 Oryza indica BGIOSGA016822 I
OMERI07G15370 Oryza meridionalis OMERI07G15370 I
ONIVA04G17990 Oryza nivara ONIVA04G17990 I
ONIVA06G20400 Oryza nivara ONIVA06G20400 I
OPUNC07G17410 Oryza punctata OPUNC07G17410 I
ORUFI04G21320 Oryza rufipogon ORUFI04G21320 I
ORUFI07G19200 Oryza rufipogon ORUFI07G19200 I
OS07G0558100 Oryza sativa OS07G0558100 I
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I
Pavir.Ga01101 Panicum virgatum Pavir.Ga01101 I
Pavir.Gb00736 Panicum virgatum Pavir.Gb00736 I
Pavir.J38204 Panicum virgatum Pavir.J38204 I
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I
POPTR_0001s41920 Populus trichocarpa POPTR_0001s41920 I
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I
POPTR_0013s14480 Populus trichocarpa POPTR_0013s14480 I
POPTR_0019s14070 Populus trichocarpa POPTR_0019s14070 I
Pm009892 Prunus mume Pm009892 I
Pm011657 Prunus mume Pm011657 I
Pm015309 Prunus mume Pm015309 I
Pm020596 Prunus mume Pm020596 I
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I
PRUPE_ppa016708mg Prunus persica PRUPE_ppa016708mg I
PRUPE_ppa021577mg Prunus persica PRUPE_ppa021577mg I
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I
29983.m003281 Ricinus communis 29983.m003281 I
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I
SapurV1A.0417s0210 Salix purpurea SapurV1A.0417s0210 I
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I
SapurV1A.0840s0010 Salix purpurea SapurV1A.0840s0010 I
SapurV1A.1088s0050 Salix purpurea SapurV1A.1088s0050 I
SapurV1A.3561s0010 Salix purpurea SapurV1A.3561s0010 I
Si030273m.g Setaria italica Si030273m.g I
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I
Solyc10g008700.1 Solanum lycopersicum Solyc10g008700.1 I
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I
PGSC0003DMG400026628 Solanum tuberosum PGSC0003DMG400026628 I
Sb02g036250 Sorghum bicolor Sb02g036250 I
Sb04g033670 Sorghum bicolor Sb04g033670 I
Sb06g023620 Sorghum bicolor Sb06g023620 I
TCM_007904 Theobroma cacao TCM_007904 I
TCM_026197 Theobroma cacao TCM_026197 I
TCM_030009 Theobroma cacao TCM_030009 I
TCM_031294 Theobroma cacao TCM_031294 I
Traes_2AL_41B71F83C Triticum aestivum Traes_2AL_41B71F83C I
Traes_2AS_FA7059723 Triticum aestivum Traes_2AS_FA7059723 I
Traes_2BL_79F1B50DF Triticum aestivum Traes_2BL_79F1B50DF I
Traes_2DL_5A0300CE0 Triticum aestivum Traes_2DL_5A0300CE0 I
Traes_2DS_49959692B1 Triticum aestivum Traes_2DS_49959692B1 I
Traes_2DS_49959692B Triticum aestivum Traes_2DS_49959692B I
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I
AtMYB41 Vitis vinifera VIT_12s0134g00570 I
GRMZM2G031323 Zea mays GRMZM2G031323 I
GRMZM2G040924 Zea mays GRMZM2G040924 I
GRMZM2G111045 Zea mays GRMZM2G111045 I
GRMZM2G166337 Zea mays GRMZM2G166337 I