ENSFALG00000015033 (Ficedula albicollis)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ENSFALG00000015033 T025983_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBED1
M02771_2.00 		Homo sapiens
HTRTCGCGACATR
YATGTCGCGAYAD		 SELEX
Jolma et al.(2013)
ZBED1_1 		1.000 1.000
ZBED1
M04056_2.00 		Homo sapiens
VTRTCGCGAYAT
ATRTCGCGAYAB		 SELEX
Yin et al.(2017)
ZBED1_eDBD_HT-SELEX 		1.000 1.000
ZBED1
M09776_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DREF_01 		1.000 1.000
ZBED1
M04057_2.00 		Homo sapiens
MTRTCGCGAYAK
MTRTCGCGAYAK		 SELEX
Yin et al.(2017)
ZBED1_eDBD_Methyl-HT-SELEX 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000015648 BED ZF 23 72

Links

Other BED ZF family TFs
Other Ficedula albicollis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bHLH104 Arabidopsis lyrata fgenesh2_kg.7__2895__AT4G14410.2 I
BHLH104 Arabidopsis thaliana AT4G14410 D
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I
Bo1g102270 Brassica oleracea Bo1g102270 I
Bo4g126940 Brassica oleracea Bo4g126940 I
Bo7g040830 Brassica oleracea Bo7g040830 I
Bra014923 Brassica rapa Bra014923 I
Bra041033 Brassica rapa Bra041033 I
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I
Carubv10005335m.g Capsella rubella Carubv10005335m.g I
evm.TU.supercontig_44.78 Carica papaya evm.TU.supercontig_44.78 I
Ciclev10005872m.g Citrus clementina Ciclev10005872m.g I
orange1.1g028060m.g Citrus sinensis orange1.1g028060m.g I
Eucgr.H00174 Eucalyptus grandis Eucgr.H00174 N
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I
gene11436-v1.0-hybrid Fragaria vesca gene11436-v1.0-hybrid I
GLYMA10G01010 Glycine max GLYMA10G01010 I
GLYMA20G22010 Glycine max GLYMA20G22010 I
Lus10021199.g Linum usitatissimum Lus10021199.g N
Lus10021876.g Linum usitatissimum Lus10021876.g N
Lus10022186.g Linum usitatissimum Lus10022186.g I
Lus10041148.g Linum usitatissimum Lus10041148.g N
POPTR_0008s16560 Populus trichocarpa POPTR_0008s16560 N
POPTR_0010s08360 Populus trichocarpa POPTR_0010s08360 N
29603.m000513 Ricinus communis 29603.m000513 N
SapurV1A.0007s0940 Salix purpurea SapurV1A.0007s0940 N
SapurV1A.0292s0060 Salix purpurea SapurV1A.0292s0060 N