Pavir.J15729 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J15729 T050891_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J15729.1.p bHLH 70 119

Links

Other bHLH family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_08186 Aegilops tauschii F775_08186 N 0.000
AMTR_s00012p00239560 Amborella trichopoda AMTR_s00012p00239560 N 0.000
BRADI4G43680 Brachypodium distachyon BRADI4G43680 N 0.000
PK20526.1 Cannabis sativa PK20526.1 N 0.000
evm.TU.supercontig_1.422 Carica papaya evm.TU.supercontig_1.422 N 0.000
Ca_21138 Cicer arietinum Ca_21138 N 0.000
Cla018179 Citrullus lanatus Cla018179 N 0.000
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.000
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.000
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.000
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.000
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.000
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.000
Eucgr.G02939 Eucalyptus grandis Eucgr.G02939 N 0.000
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.000
GLYMA03G10320 Glycine max GLYMA03G10320 N 0.000
GLYMA18G39920 Glycine max GLYMA18G39920 N 0.000
GLYMA07G15950 Glycine max GLYMA07G15950 N 0.000
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N 0.000
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.000
MLOC_73193 Hordeum vulgare MLOC_73193 N 0.000
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.000
Lus10040284.g Linum usitatissimum Lus10040284.g N 0.000
Lus10024384.g Linum usitatissimum Lus10024384.g N 0.000
Lus10023404.g Linum usitatissimum Lus10023404.g N 0.000
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N 0.000
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N 0.000
cassava15723.m1 Manihot esculenta cassava15723.m1 N 0.000
mgf014897m Mimulus guttatus mgf014897m N 0.000
mgf011165m Mimulus guttatus mgf011165m N 0.000
OBART03G30260 Oryza barthii OBART03G30260 N 0.000
OB03G37330 Oryza brachyantha OB03G37330 N 0.000
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.000
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.000
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.000
OLONG_013585 Oryza longistaminata OLONG_013585 N 0.000
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.000
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.000
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.000
ORUFI03G31480 Oryza rufipogon ORUFI03G31480 N 0.000
OS03G0690600 Oryza sativa OS03G0690600 N 0.000
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N 0.000
Pavir.J32327 Panicum virgatum Pavir.J32327 N 0.000
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N 0.000
XM_002316242.1 Populus trichocarpa POPTR_0010s20980 N 0.000
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N 0.000
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.000
Pm002685 Prunus mume Pm002685 N 0.000
Pm018822 Prunus mume Pm018822 N 0.000
PRUPE_ppa021438mg Prunus persica PRUPE_ppa021438mg N 0.000
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.000
27568.m000253 Ricinus communis 27568.m000253 N 0.000
29767.m000200 Ricinus communis 29767.m000200 N 0.000
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N 0.000
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.000
Si034417m.g Setaria italica Si034417m.g N 0.000
Solyc10g086530.1 Solanum lycopersicum Solyc10g086530.1 N 0.000
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N 0.000
Solyc04g011630.1 Solanum lycopersicum Solyc04g011630.1 N 0.000
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.000
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N 0.000
PGSC0003DMG400006352 Solanum tuberosum PGSC0003DMG400006352 N 0.000
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.000
TCM_021920 Theobroma cacao TCM_021920 N 0.000
TCM_042705 Theobroma cacao TCM_042705 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
Traes_5AL_9AE0ED26A Triticum aestivum Traes_5AL_9AE0ED26A N 0.000
Traes_5BL_C8BEC527F Triticum aestivum Traes_5BL_C8BEC527F N 0.000
Traes_5DL_8FD0CF6B9 Triticum aestivum Traes_5DL_8FD0CF6B9 N 0.000
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.000
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N 0.000
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.000
VIT_13s0019g01810 Vitis vinifera VIT_13s0019g01810 N 0.000
GRMZM2G098784 Zea mays GRMZM2G098784 N 0.000
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.000