crema (Danio rerio)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSDARG00000023217 T059397_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Crem
M01821_2.00 		Mus musculus
NRTKACGTMN
NKACGTMAYN		 PBM
Weirauch et al.(2014)
pTH5002 		0.887 0.966
Crem
M08845_2.00 		Mus musculus
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C 		0.887 0.966
CREM
M04229_2.00 		Homo sapiens
VVTBACGTVABN
NVTBACGTVABB		 SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX 		0.826 0.875
Creb1
M00992_2.00 		Mus musculus
NNTGACGTCV
BGACGTCANN		 PBM
Mann et al.(2013)
CREB1_UM_HK 		0.877 0.966
CREM
M08784_2.00 		Homo sapiens
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C 		0.826 0.875
Creb1
M01806_2.00 		Mus musculus
VTKACGHNN
NNDCGTMAB		 PBM
Weirauch et al.(2014)
pTH5080 		0.877 0.966
CREB1
M04264_2.00 		Homo sapiens
NVTKACGTMABN
NVTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX 		0.877 0.966
CREM
M09930_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6_01 		0.826 0.875
CREB1
M04258_2.00 		Homo sapiens
NVTKACGTMANN
NNTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1 		0.877 0.966
CREM
M09931_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6 		0.826 0.875
CREM
M04230_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX 		0.826 0.875
CREB1
M04259_2.00 		Homo sapiens
NRTGACGTR
YACGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2 		0.877 0.966
CREB1
M04260_2.00 		Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3 		0.877 0.966
CREB1
M04022_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1 		0.877 0.966
CREB1
M04023_2.00 		Homo sapiens
RTGACGTADB
VHTACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2 		0.877 0.966
CREB1
M08066_2.00 		Homo sapiens
NVTGACGTCABN
NVTGACGTCABN		 ChIP-seq
Mathelier et al.(2014)
MA0018.3 		0.877 0.966
CREB1
M08791_2.00 		Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A 		0.877 0.966
Creb1
M08824_2.00 		Mus musculus
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A 		0.877 0.966
CREB1
M09948_2.00 		Homo sapiens
TGACGTMW
WKACGTCA		 Transfac
Matys et al.(2006)
V$CREB_01 		0.877 0.966
CREB1
M09949_2.00 		Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV		 Transfac
Matys et al.(2006)
V$CREB_02 		0.877 0.966
CREB1
M09950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q3 		0.877 0.966
CREB1
M09951_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q6 		0.877 0.966
CREB1
M09952_2.00 		Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q2 		0.877 0.966
CREB1
M09953_2.00 		Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q4 		0.877 0.966
CREB1
M09954_2.00 		Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM		 Transfac
Matys et al.(2006)
V$TAXCREB_01 		0.877 0.966
CREB1
M09955_2.00 		Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY		 Transfac
Matys et al.(2006)
V$TAXCREB_02 		0.877 0.966
Creb1
M00991_2.00 		Mus musculus
NNRTGACGYVN
NBRCGTCAYNN		 PBM
Mann et al.(2013)
CREB1_M_HK 		0.877 0.966
CREB1
M04265_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX 		0.877 0.966
CREB1
M04261_2.00 		Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1 		0.877 0.966
CREB1
M04262_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2 		0.877 0.966
CREB1
M04263_2.00 		Homo sapiens
NRTGACGYV
BRCGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3 		0.877 0.966
ATF1
M08792_2.00 		Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD		 Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B 		0.875 0.847
ATF1
M09485_2.00 		Homo sapiens
NVTGACGTMA
TKACGTCABN		 Misc
Heinz et al.(2010)
K562-ATF1_GSE31477 		0.875 0.847
ATF1
M09956_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q3 		0.875 0.847
ATF1
M09957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6_01 		0.875 0.847
ATF1
M09958_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6 		0.875 0.847
Atf1
M00124_2.00 		Mus musculus
NNNNDNDNNN
NNNHNHNNNN		 PBM
Badis et al.(2009)
Atf1_3026 		0.864 0.847
Atf1
M01804_2.00 		Mus musculus
RTGACGTV
BACGTCAY		 PBM
Weirauch et al.(2014)
pTH5005 		0.864 0.847
Atf1
M08820_2.00 		Mus musculus
VTGACGTSAV
BTSACGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B 		0.864 0.847
CrebB-17A
M03659_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_1 		0.793 0.875
CrebB-17A
M03660_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_2 		0.829 0.814
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000021338 bZIP 240 298
ENSDARP00000112661 bZIP 50 108
ENSDARP00000116638 bZIP 240 279

Links

Other bZIP family TFs
Other Danio rerio TFs

360 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N
SCR Arabidopsis thaliana AT3G54220 N
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N
Bo8g083500 Brassica oleracea Bo8g083500 N
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N
Carubv10016802m.g Capsella rubella Carubv10016802m.g N
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N
Ca_09530 Cicer arietinum Ca_09530 N
Cla012346 Citrullus lanatus Cla012346 N
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N
Cucsa.002880 Cucumis sativus Cucsa.002880 N
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N
GLYMA18G45220 Glycine max GLYMA18G45220 N
GLYMA09G40620 Glycine max GLYMA09G40620 N
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N
MLOC_64716 Hordeum vulgare MLOC_64716 N
LPERR11G01220 Leersia perrieri LPERR11G01220 N
LPERR12G01340 Leersia perrieri LPERR12G01340 N
Lus10040734.g Linum usitatissimum Lus10040734.g N
Lus10016496.g Linum usitatissimum Lus10016496.g N
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N
MDP0000397638 Malus domestica MDP0000397638 N
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N
MTR_7g074650 Medicago truncatula MTR_7g074650 N
mgf012242m Mimulus guttatus mgf012242m N
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N
OBART12G01190 Oryza barthii OBART12G01190 N
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N
BGIOSGA034703 Oryza indica BGIOSGA034703 N
BGIOSGA036912 Oryza indica BGIOSGA036912 N
OLONG_010321 Oryza longistaminata OLONG_010321 N
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N
SCR2 Oryza sativa OS12G0122000 N
SCR1 Oryza sativa OS11G0124300 N
Pavir.J08573 Panicum virgatum Pavir.J08573 N
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N
Pm002956 Prunus mume Pm002956 N
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N
30073.m002204 Ricinus communis 30073.m002204 N
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N
Sb05g001500 Sorghum bicolor Sb05g001500 N
TCM_017746 Theobroma cacao TCM_017746 N
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N
SCR Vitis vinifera VIT_08s0056g00050 N
GRMZM2G015080 Zea mays GRMZM2G015080 N
GRMZM2G131516 Zea mays GRMZM2G131516 N