CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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creb1a
(
Danio rerio
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSDARG00000053586
T059420_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Creb1
M00992_2.00
Mus musculus
NNTGACGTCV
BGACGTCANN
PBM
Mann et al.(2013)
CREB1_UM_HK
0.896
0.983
Creb1
M01806_2.00
Mus musculus
VTKACGHNN
NNDCGTMAB
PBM
Weirauch et al.(2014)
pTH5080
0.896
0.983
CREB1
M04264_2.00
Homo sapiens
NVTKACGTMABN
NVTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX
0.896
0.983
CREB1
M04258_2.00
Homo sapiens
NVTKACGTMANN
NNTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1
0.896
0.983
CREB1
M04259_2.00
Homo sapiens
NRTGACGTR
YACGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2
0.896
0.983
CREB1
M04260_2.00
Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3
0.896
0.983
CREB1
M04022_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1
0.896
0.983
CREB1
M04023_2.00
Homo sapiens
RTGACGTADB
VHTACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2
0.896
0.983
CREB1
M08066_2.00
Homo sapiens
NVTGACGTCABN
NVTGACGTCABN
ChIP-seq
Mathelier et al.(2014)
MA0018.3
0.896
0.983
CREB1
M08791_2.00
Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A
0.896
0.983
Creb1
M08824_2.00
Mus musculus
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A
0.896
0.983
CREB1
M09948_2.00
Homo sapiens
TGACGTMW
WKACGTCA
Transfac
Matys et al.(2006)
V$CREB_01
0.896
0.983
CREB1
M09949_2.00
Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV
Transfac
Matys et al.(2006)
V$CREB_02
0.896
0.983
CREB1
M09950_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q3
0.896
0.983
CREB1
M09951_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q6
0.896
0.983
CREB1
M09952_2.00
Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q2
0.896
0.983
CREB1
M09953_2.00
Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q4
0.896
0.983
CREB1
M09954_2.00
Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM
Transfac
Matys et al.(2006)
V$TAXCREB_01
0.896
0.983
CREB1
M09955_2.00
Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY
Transfac
Matys et al.(2006)
V$TAXCREB_02
0.896
0.983
Creb1
M00991_2.00
Mus musculus
NNRTGACGYVN
NBRCGTCAYNN
PBM
Mann et al.(2013)
CREB1_M_HK
0.896
0.983
CREB1
M04265_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX
0.896
0.983
CREB1
M04261_2.00
Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1
0.896
0.983
CREB1
M04262_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2
0.896
0.983
CREB1
M04263_2.00
Homo sapiens
NRTGACGYV
BRCGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3
0.896
0.983
ATF1
M08792_2.00
Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD
Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B
0.894
0.867
ATF1
M09485_2.00
Homo sapiens
NVTGACGTMA
TKACGTCABN
Misc
Heinz et al.(2010)
K562-ATF1_GSE31477
0.894
0.867
ATF1
M09956_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q3
0.894
0.867
ATF1
M09957_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6_01
0.894
0.867
ATF1
M09958_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6
0.894
0.867
Crem
M01821_2.00
Mus musculus
NRTKACGTMN
NKACGTMAYN
PBM
Weirauch et al.(2014)
pTH5002
0.892
0.967
Crem
M08845_2.00
Mus musculus
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C
0.892
0.967
Atf1
M00124_2.00
Mus musculus
NNNNDNDNNN
NNNHNHNNNN
PBM
Badis et al.(2009)
Atf1_3026
0.883
0.867
Atf1
M01804_2.00
Mus musculus
RTGACGTV
BACGTCAY
PBM
Weirauch et al.(2014)
pTH5005
0.883
0.867
Atf1
M08820_2.00
Mus musculus
VTGACGTSAV
BTSACGTCAB
Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B
0.883
0.867
CREM
M04229_2.00
Homo sapiens
VVTBACGTVABN
NVTBACGTVABB
SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX
0.862
0.783
CREM
M08784_2.00
Homo sapiens
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C
0.862
0.783
CREM
M09930_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6_01
0.862
0.783
CREM
M09931_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6
0.862
0.783
CREM
M04230_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX
0.862
0.783
CrebB-17A
M03659_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_1
0.829
0.817
CrebB-17A
M03660_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_2
0.829
0.817
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000070114
bZIP
258
317
EATRKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKS
Links
Other
bZIP
family TFs
Other
Danio rerio
TFs
360 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00007p00193000
Amborella trichopoda
AMTR_s00007p00193000
I
0.000
AMTR_s00036p00166880
Amborella trichopoda
AMTR_s00036p00166880
I
0.000
Aquca_004_00181
Aquilegia coerulea
Aquca_004_00181
I
0.000
TRB2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8002157
I
0.000
TRB1
Arabidopsis lyrata
fgenesh2_kg.1__4077__AT1G49950.2
I
0.000
TRB3
Arabidopsis lyrata
fgenesh2_kg.5__1337__AT3G49850.1
I
0.000
scaffold_101953.1
Arabidopsis lyrata
scaffold_101953.1
I
0.000
AT1G17520
Arabidopsis thaliana
AT1G17520
I
0.000
TRB1
Arabidopsis thaliana
AT1G49950
D
0.000
TRB3
Arabidopsis thaliana
AT3G49850
I
0.000
TRB2
Arabidopsis thaliana
AT5G67580
D
0.000
Bostr.0568s0184
Boechera stricta
Bostr.0568s0184
I
0.000
Bostr.26675s0174
Boechera stricta
Bostr.26675s0174
I
0.000
Bostr.6864s0256
Boechera stricta
Bostr.6864s0256
I
0.000
Bostr.7128s0363
Boechera stricta
Bostr.7128s0363
I
0.000
BRADI2G42240
Brachypodium distachyon
BRADI2G42240
I
0.000
BRADI4G01770
Brachypodium distachyon
BRADI4G01770
I
0.000
Bo1g081300
Brassica oleracea
Bo1g081300
I
0.000
Bo3g096520
Brassica oleracea
Bo3g096520
I
0.000
Bo5g023860
Brassica oleracea
Bo5g023860
I
0.000
Bo5g077530
Brassica oleracea
Bo5g077530
I
0.000
Bo6g018740
Brassica oleracea
Bo6g018740
I
0.000
Bo6g116150
Brassica oleracea
Bo6g116150
I
0.000
Bo8g067280
Brassica oleracea
Bo8g067280
I
0.000
Bo8g104830
Brassica oleracea
Bo8g104830
I
0.000
Bo9g019040
Brassica oleracea
Bo9g019040
I
0.000
Bra016037
Brassica rapa
Bra016037
I
0.000
Bra016598
Brassica rapa
Bra016598
I
0.000
Bra018818
Brassica rapa
Bra018818
I
0.000
Bra024438
Brassica rapa
Bra024438
I
0.000
Bra025967
Brassica rapa
Bra025967
I
0.000
Bra029978
Brassica rapa
Bra029978
I
0.000
Bra030992
Brassica rapa
Bra030992
I
0.000
Bra037837
Brassica rapa
Bra037837
I
0.000
Bra037839
Brassica rapa
Bra037839
I
0.000
Bra039650
Brassica rapa
Bra039650
I
0.000
PK06103.1
Cannabis sativa
PK06103.1
D
0.000
PK19870.1
Cannabis sativa
PK19870.1
I
0.000
Cagra.0342s0046
Capsella grandiflora
Cagra.0342s0046
I
0.000
Cagra.0824s0121
Capsella grandiflora
Cagra.0824s0121
I
0.000
Cagra.2826s0004
Capsella grandiflora
Cagra.2826s0004
I
0.000
Cagra.4491s0006
Capsella grandiflora
Cagra.4491s0006
I
0.000
Carubv10009836m.g
Capsella rubella
Carubv10009836m.g
I
0.000
Carubv10009890m.g
Capsella rubella
Carubv10009890m.g
I
0.000
Carubv10017722m.g
Capsella rubella
Carubv10017722m.g
I
0.000
Carubv10026874m.g
Capsella rubella
Carubv10026874m.g
I
0.000
evm.TU.supercontig_106.31
Carica papaya
evm.TU.supercontig_106.31
I
0.000
evm.TU.supercontig_25.81
Carica papaya
evm.TU.supercontig_25.81
I
0.000
Ca_02232
Cicer arietinum
Ca_02232
I
0.000
Ca_08043
Cicer arietinum
Ca_08043
I
0.000
Ca_09355
Cicer arietinum
Ca_09355
I
0.000
Cla006547
Citrullus lanatus
Cla006547
I
0.000
Cla012798
Citrullus lanatus
Cla012798
I
0.000
Cla014248
Citrullus lanatus
Cla014248
I
0.000
Ciclev10026089m.g
Citrus clementina
Ciclev10026089m.g
I
0.000
Ciclev10026245m.g
Citrus clementina
Ciclev10026245m.g
I
0.000
Ciclev10028926m.g
Citrus clementina
Ciclev10028926m.g
I
0.000
orange1.1g020653m.g
Citrus sinensis
orange1.1g020653m.g
I
0.000
orange1.1g022048m.g
Citrus sinensis
orange1.1g022048m.g
I
0.000
orange1.1g023740m.g
Citrus sinensis
orange1.1g023740m.g
I
0.000
Cucsa.103240
Cucumis sativus
Cucsa.103240
I
0.000
Cucsa.298390
Cucumis sativus
Cucsa.298390
I
0.000
Cucsa.341020
Cucumis sativus
Cucsa.341020
I
0.000
Eucgr.I01053
Eucalyptus grandis
Eucgr.I01053
I
0.000
Thhalv10004691m.g
Eutrema salsugineum
Thhalv10004691m.g
I
0.000
Thhalv10008387m.g
Eutrema salsugineum
Thhalv10008387m.g
I
0.000
Thhalv10010562m.g
Eutrema salsugineum
Thhalv10010562m.g
I
0.000
Thhalv10011686m.g
Eutrema salsugineum
Thhalv10011686m.g
I
0.000
gene05764-v1.0-hybrid
Fragaria vesca
gene05764-v1.0-hybrid
I
0.000
gene25445-v1.0-hybrid
Fragaria vesca
gene25445-v1.0-hybrid
I
0.000
GLYMA01G40220
Glycine max
GLYMA01G40220
I
0.000
GLYMA05G22500
Glycine max
GLYMA05G22500
I
0.000
GLYMA07G00930
Glycine max
GLYMA07G00930
I
0.000
GLYMA08G20270
Glycine max
GLYMA08G20270
I
0.000
GLYMA11G05070
Glycine max
GLYMA11G05070
I
0.000
GLYMA17G17370
Glycine max
GLYMA17G17370
I
0.000
Gorai.003G030800
Gossypium raimondii
Gorai.003G030800
I
0.000
Gorai.005G230800
Gossypium raimondii
Gorai.005G230800
I
0.000
Gorai.007G224200
Gossypium raimondii
Gorai.007G224200
I
0.000
Gorai.009G143000
Gossypium raimondii
Gorai.009G143000
I
0.000
MLOC_10278
Hordeum vulgare
MLOC_10278
I
0.000
LPERR01G18090
Leersia perrieri
LPERR01G18090
I
0.000
Lus10012092.g
Linum usitatissimum
Lus10012092.g
I
0.000
Lus10014653.g
Linum usitatissimum
Lus10014653.g
I
0.000
Lus10025203.g
Linum usitatissimum
Lus10025203.g
I
0.000
Lus10033775.g
Linum usitatissimum
Lus10033775.g
I
0.000
LjT25P15.150.nd
Lotus japonicus
LjT25P15.150.nd
I
0.000
MDP0000239354
Malus domestica
MDP0000239354
I
0.000
cassava19326.valid.m1
Manihot esculenta
cassava19326.valid.m1
I
0.000
cassava34930.m1
Manihot esculenta
cassava34930.m1
I
0.000
cassava37744.valid.m1
Manihot esculenta
cassava37744.valid.m1
I
0.000
cassava7508.valid.m1
Manihot esculenta
cassava7508.valid.m1
I
0.000
MTR_0095s0040
Medicago truncatula
MTR_0095s0040
I
0.000
MTR_1g041765
Medicago truncatula
MTR_1g041765
I
0.000
MTR_4g097130
Medicago truncatula
MTR_4g097130
I
0.000
MTR_5g015340
Medicago truncatula
MTR_5g015340
I
0.000
MTR_8g494240
Medicago truncatula
MTR_8g494240
I
0.000
EuGene.0000030935
Micromonas pusilla
EuGene.0000030935
I
0.000
EuGene.0500010080
Micromonas sp RCC299
EuGene.0500010080
I
0.000
mgf004823m
Mimulus guttatus
mgf004823m
I
0.000
mgf009594m
Mimulus guttatus
mgf009594m
I
0.000
GSMUA_Achr2G13040_001
Musa acuminata
GSMUA_Achr2G13040_001
I
0.000
GSMUA_Achr7G01090_001
Musa acuminata
GSMUA_Achr7G01090_001
I
0.000
OBART01G21150
Oryza barthii
OBART01G21150
I
0.000
OBART01G28260
Oryza barthii
OBART01G28260
I
0.000
OB01G30760
Oryza brachyantha
OB01G30760
I
0.000
OB01G37330
Oryza brachyantha
OB01G37330
I
0.000
ORGLA01G0168300
Oryza glaberrima
ORGLA01G0168300
I
0.000
ORGLA01G0233700
Oryza glaberrima
ORGLA01G0233700
I
0.000
OGLUM01G32190
Oryza glumaepatula
OGLUM01G32190
I
0.000
BGIOSGA003871
Oryza indica
BGIOSGA003871
I
0.000
BGIOSGA004300
Oryza indica
BGIOSGA004300
I
0.000
OLONG_008666
Oryza longistaminata
OLONG_008666
I
0.000
OLONG_011068
Oryza longistaminata
OLONG_011068
I
0.000
OMERI01G19490
Oryza meridionalis
OMERI01G19490
I
0.000
OMERI01G19510
Oryza meridionalis
OMERI01G19510
I
0.000
OMERI05G07460
Oryza meridionalis
OMERI05G07460
I
0.000
ONIVA01G23780
Oryza nivara
ONIVA01G23780
I
0.000
ONIVA01G32190
Oryza nivara
ONIVA01G32190
I
0.000
OPUNC01G21220
Oryza punctata
OPUNC01G21220
I
0.000
OPUNC01G28080
Oryza punctata
OPUNC01G28080
I
0.000
ORUFI01G23880
Oryza rufipogon
ORUFI01G23880
I
0.000
ORUFI01G31370
Oryza rufipogon
ORUFI01G31370
I
0.000
OS01G0589300
Oryza sativa
OS01G0589300
I
0.000
OS01G0708000
Oryza sativa
OS01G0708000
D
0.000
OSTLU_27049
Ostreococcus lucimarinus
OSTLU_27049
I
0.000
EuGene.1300010252
Ostreococcus RCC809
EuGene.1300010252
I
0.000
Pavir.Ea02064
Panicum virgatum
Pavir.Ea02064
I
0.000
Pavir.J27218
Panicum virgatum
Pavir.J27218
I
0.000
PDK_20s1413011g001
Phoenix dactylifera
PDK_20s1413011g001
I
0.000
PDK_20s1467521g002
Phoenix dactylifera
PDK_20s1467521g002
I
0.000
PDK_20s1888511g002
Phoenix dactylifera
PDK_20s1888511g002
I
0.000
gw1.1.287.1
Physcomitrella patens
gw1.1.287.1
I
0.000
gw1.176.27.1
Physcomitrella patens
gw1.176.27.1
I
0.000
POPTR_0001s30000
Populus trichocarpa
POPTR_0001s30000
I
0.000
POPTR_0007s14920
Populus trichocarpa
POPTR_0007s14920
I
0.000
POPTR_0009s09020
Populus trichocarpa
POPTR_0009s09020
I
0.000
POPTR_0014s01010
Populus trichocarpa
POPTR_0014s01010
I
0.000
Pm002374
Prunus mume
Pm002374
I
0.000
Pm021139
Prunus mume
Pm021139
I
0.000
PRUPE_ppa009220mg
Prunus persica
PRUPE_ppa009220mg
I
0.000
PRUPE_ppa011492mg
Prunus persica
PRUPE_ppa011492mg
I
0.000
29661.m000926
Ricinus communis
29661.m000926
I
0.000
29706.m001328
Ricinus communis
29706.m001328
I
0.000
29812.m000204
Ricinus communis
29812.m000204
I
0.000
SapurV1A.0005s0260
Salix purpurea
SapurV1A.0005s0260
I
0.000
SapurV1A.0019s0460
Salix purpurea
SapurV1A.0019s0460
I
0.000
SapurV1A.0235s0100
Salix purpurea
SapurV1A.0235s0100
I
0.000
SapurV1A.1368s0050
Salix purpurea
SapurV1A.1368s0050
I
0.000
SELMODRAFT_413266
Selaginella moellendorffii
SELMODRAFT_413266
I
0.000
SELMODRAFT_426759
Selaginella moellendorffii
SELMODRAFT_426759
I
0.000
SELMODRAFT_443975
Selaginella moellendorffii
SELMODRAFT_443975
I
0.000
SELMODRAFT_49296
Selaginella moellendorffii
SELMODRAFT_49296
I
0.000
SELMODRAFT_49297
Selaginella moellendorffii
SELMODRAFT_49297
I
0.000
SELMODRAFT_49312
Selaginella moellendorffii
SELMODRAFT_49312
I
0.000
Si002403m.g
Setaria italica
Si002403m.g
I
0.000
Solyc02g064630.2
Solanum lycopersicum
Solyc02g064630.2
I
0.000
Solyc11g044320.1
Solanum lycopersicum
Solyc11g044320.1
I
0.000
PGSC0003DMG400023131
Solanum tuberosum
PGSC0003DMG400023131
I
0.000
PGSC0003DMG401025742
Solanum tuberosum
PGSC0003DMG401025742
I
0.000
PGSC0003DMG402003328
Solanum tuberosum
PGSC0003DMG402003328
I
0.000
Sb03g026470
Sorghum bicolor
Sb03g026470
I
0.000
TCM_000807
Theobroma cacao
TCM_000807
I
0.000
TCM_007242
Theobroma cacao
TCM_007242
I
0.000
TCM_029078
Theobroma cacao
TCM_029078
I
0.000
Traes_3AL_CF481F6AC
Triticum aestivum
Traes_3AL_CF481F6AC
I
0.000
TRAES3BF118300070CFD_g
Triticum aestivum
TRAES3BF118300070CFD_g
I
0.000
Traes_5AS_8756ECB5A
Triticum aestivum
Traes_5AS_8756ECB5A
I
0.000
Traes_5BS_EB206B8BC
Triticum aestivum
Traes_5BS_EB206B8BC
I
0.000
Traes_5DS_3EE830A43
Triticum aestivum
Traes_5DS_3EE830A43
I
0.000
TRIUR3_08672
Triticum urartu
TRIUR3_08672
I
0.000
TRIUR3_10613
Triticum urartu
TRIUR3_10613
I
0.000
VIT_00s1311g00020
Vitis vinifera
VIT_00s1311g00020
I
0.000
TRB1
Vitis vinifera
VIT_03s0091g01030
I
0.000
VIT_07s0151g00480
Vitis vinifera
VIT_07s0151g00480
I
0.000
GRMZM2G087817
Zea mays
GRMZM2G087817
I
0.000
GRMZM2G136887
Zea mays
GRMZM2G136887
I
0.000