HLF (Otolemur garnettii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSOGAG00000007056 T060698_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.896 1.000
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.896 1.000
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.896 1.000
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.896 1.000
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.896 1.000
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.896 1.000
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.896 1.000
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.896 1.000
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.847 0.794
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.847 0.794
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.847 0.794
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.847 0.794
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.847 0.794
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.847 0.794
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.847 0.794
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.847 0.794
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.847 0.794
Pdp1
M03645_2.00 		Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB		 SELEX
Nitta et al.(2015)
Pdp1_1 		0.795 0.683
Pdp1
M03646_2.00 		Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY		 SELEX
Nitta et al.(2015)
Pdp1_2 		0.795 0.683
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000006316 bZIP 224 286

Links

Other bZIP family TFs
Other Otolemur garnettii TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.000
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.000
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.000
SCR Arabidopsis thaliana AT3G54220 N 0.000
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.000
BRADI4G44090 Brachypodium distachyon BRADI4G44090 N 0.000
Bo8g083500 Brassica oleracea Bo8g083500 N 0.000
Bra007056 Brassica rapa Bra007056 N 0.000
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.000
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.000
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.000
Ca_09530 Cicer arietinum Ca_09530 N 0.000
Cla012346 Citrullus lanatus Cla012346 N 0.000
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.000
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.000
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.000
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.000
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.000
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.000
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.000
MLOC_79758 Hordeum vulgare MLOC_79758 N 0.000
LPERR11G01210 Leersia perrieri LPERR11G01210 N 0.000
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.000
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.000
MDP0000397638 Malus domestica MDP0000397638 N 0.000
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.000
mgf012242m Mimulus guttatus mgf012242m N 0.000
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.000
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.000
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.000
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.000
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.000
SCR2 Oryza sativa OS12G0122000 N 0.000
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.000
Pm002956 Prunus mume Pm002956 N 0.000
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.000
30073.m002204 Ricinus communis 30073.m002204 N 0.000
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.000
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.000
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.000
TCM_017746 Theobroma cacao TCM_017746 N 0.000
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.000
Traes_5DL_3EC609F62 Triticum aestivum Traes_5DL_3EC609F62 N 0.000
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.000
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.000
TRIUR3_28106 Triticum urartu TRIUR3_28106 N 0.000
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.000