BRADI3G37890 (Brachypodium distachyon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BRADI3G37890 T082016_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.759 0.884
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.759 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G37890.1 C2H2 ZF 104 125
BRADI3G37890.1 C2H2 ZF 125 151

Links

Other C2H2 ZF family TFs
Other Brachypodium distachyon TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.000
Aquca_003_00272 Aquilegia coerulea Aquca_003_00272 N 0.000
Aquca_003_00271 Aquilegia coerulea Aquca_003_00271 N 0.000
Aquca_003_00270 Aquilegia coerulea Aquca_003_00270 N 0.000
Aquca_003_00269 Aquilegia coerulea Aquca_003_00269 N 0.000
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.000
Aquca_029_00010 Aquilegia coerulea Aquca_029_00010 N 0.000
evm.TU.contig_25049.2 Carica papaya evm.TU.contig_25049.2 N 0.000
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.000
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.000
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.000
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.000
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.000
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I 0.000
evm.TU.contig_35762 Carica papaya evm.TU.contig_35762 N 0.000
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N 0.000
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.000
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I 0.000
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.000
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.000
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.000
evm.TU.supercontig_185.7 Carica papaya evm.TU.supercontig_185.7 I 0.000
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.000
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N 0.000
evm.TU.supercontig_30.164 Carica papaya evm.TU.supercontig_30.164 N 0.000
Ca_08934 Cicer arietinum Ca_08934 I 0.000
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.000
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.000
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.000
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I 0.000
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.000
MDP0000925348 Malus domestica MDP0000925348 I 0.000
MTR_4g031910 Medicago truncatula MTR_4g031910 N 0.000
GSMUA_Achr8G06150_001 Musa acuminata GSMUA_Achr8G06150_001 N 0.000
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N 0.000
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.000
GSMUA_Achr2G18410_001 Musa acuminata GSMUA_Achr2G18410_001 N 0.000
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.000
Pavir.Ib03850 Panicum virgatum Pavir.Ib03850 N 0.000
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.000
Pm004396 Prunus mume Pm004396 I 0.000
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.000
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.000
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.000
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.000
TCM_022993 Theobroma cacao TCM_022993 N 0.000