ZNF408 (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000015791 T108789_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000014896 C2H2 ZF 346 368
ENSPVAP00000014896 C2H2 ZF 374 396
ENSPVAP00000014896 C2H2 ZF 402 424
ENSPVAP00000014896 C2H2 ZF 430 452
ENSPVAP00000014896 C2H2 ZF 461 483
ENSPVAP00000014896 C2H2 ZF 489 511
ENSPVAP00000014896 C2H2 ZF 517 539
ENSPVAP00000014896 C2H2 ZF 544 566
ENSPVAP00000014896 C2H2 ZF 572 594
ENSPVAP00000014896 C2H2 ZF 600 622

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.000
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.000
SCL3 Arabidopsis thaliana AT1G50420 N 0.000
Bo3g179450 Brassica oleracea Bo3g179450 N 0.000
Bra018848 Brassica rapa Bra018848 N 0.000
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.000
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.000
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.000
Ca_27441 Cicer arietinum Ca_27441 N 0.000
Cla006433 Citrullus lanatus Cla006433 N 0.000
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.000
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.000
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.000
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.000
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.000
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.000
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.000
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.000
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.000
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.000
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.000
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.000
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.000
Pm012190 Prunus mume Pm012190 N 0.000
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.000
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.000
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.000
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.000
TCM_042392 Theobroma cacao TCM_042392 N 0.000
TCM_040833 Theobroma cacao TCM_040833 N 0.000
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.000