Traes_5BL_F74D668D9 (Triticum aestivum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Traes_5BL_F74D668D9 T130617_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.760 0.717
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.760 0.717
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.759 0.717
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.759 0.674
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_5BL_F74D668D9.1 C2H2 ZF 64 91
Traes_5BL_F74D668D9.1 C2H2 ZF 114 136

Links

Other C2H2 ZF family TFs
Other Triticum aestivum TFs

322 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I
GLYMA18G04500 Glycine max GLYMA18G04500 I
GLYMA11G33720 Glycine max GLYMA11G33720 I
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I
MLOC_67940 Hordeum vulgare MLOC_67940 N
LPERR03G26000 Leersia perrieri LPERR03G26000 N
Lus10033583.g Linum usitatissimum Lus10033583.g N
Lus10017626.g Linum usitatissimum Lus10017626.g N
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N
MDP0000669451 Malus domestica MDP0000669451 I
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I
cassava15077.m1 Manihot esculenta cassava15077.m1 N
cassava14484.m1 Manihot esculenta cassava14484.m1 N
mgf008289m Mimulus guttatus mgf008289m N
OBART03G31370 Oryza barthii OBART03G31370 N
OB03G38380 Oryza brachyantha OB03G38380 N
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N
SLR1 Oryza indica BGIOSGA013420 N
OLONG_002563 Oryza longistaminata OLONG_002563 N
OMERI03G27970 Oryza meridionalis OMERI03G27970 N
ONIVA03G32670 Oryza nivara ONIVA03G32670 N
OPUNC03G28530 Oryza punctata OPUNC03G28530 N
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N
SLR1 Oryza sativa OS03G0707600 N
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I
Pm014329 Prunus mume Pm014329 I
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I
29692.m000540 Ricinus communis 29692.m000540 N
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N
Si039400m.g Setaria italica Si039400m.g N
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N
Sb01g010660 Sorghum bicolor Sb01g010660 N
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N
TRIUR3_18790 Triticum urartu TRIUR3_18790 N
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I
GAI1 Vitis vinifera VIT_01s0011g05260 N
GRMZM2G144744 Zea mays GRMZM2G144744 N