OBART11G01460 (Oryza barthii)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 OBART11G01460 T200668_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART11G01460.1 GRAS 100 461

Links

Other GRAS family TFs
Other Oryza barthii TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.759
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.795
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.767
SCR Arabidopsis thaliana AT3G54220 N 0.767
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.767
Bo8g083500 Brassica oleracea Bo8g083500 N 0.767
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.767
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.767
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.792
Ca_09530 Cicer arietinum Ca_09530 N 0.778
Cla012346 Citrullus lanatus Cla012346 N 0.792
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.799
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.799
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.789
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.787
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.770
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.795
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.787
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.787
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.783
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.753
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.898
LPERR11G01220 Leersia perrieri LPERR11G01220 N 1.000
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.984
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.734
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.731
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.792
MDP0000397638 Malus domestica MDP0000397638 N 0.803
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.808
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.802
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.784
mgf012242m Mimulus guttatus mgf012242m N 0.778
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.823
OBART12G01190 Oryza barthii OBART12G01190 N 0.867
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.867
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.983
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.975
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.859
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.953
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.975
SCR2 Oryza sativa OS12G0122000 N 0.975
SCR1 Oryza sativa OS11G0124300 N 0.981
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.906
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.799
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.798
Pm002956 Prunus mume Pm002956 N 0.806
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.809
30073.m002204 Ricinus communis 30073.m002204 N 0.798
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.767
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.798
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.792
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.789
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.931
TCM_017746 Theobroma cacao TCM_017746 N 0.797
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.895
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.903
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.892
SCR Vitis vinifera VIT_08s0056g00050 N 0.818
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.897
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.962